ID A0A1S4C9E4_TOBAC Unreviewed; 575 AA.
AC A0A1S4C9E4;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Uncharacterized protein LOC107816519 {ECO:0000313|RefSeq:XP_016497731.1};
GN Name=LOC107816519 {ECO:0000313|RefSeq:XP_016497731.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016497731.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016497731.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016497731.1; XM_016642245.1.
DR AlphaFoldDB; A0A1S4C9E4; -.
DR SMR; A0A1S4C9E4; -.
DR STRING; 4097.A0A1S4C9E4; -.
DR PaxDb; 4097-A0A1S4C9E4; -.
DR GeneID; 107816519; -.
DR KEGG; nta:107816519; -.
DR OrthoDB; 1130522at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR46890:SF34; NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE; 1.
DR PANTHER; PTHR46890; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000084051}.
FT DOMAIN 1..160
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 462..575
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 575 AA; 65828 MW; 8CED71D93ACAB02C CRC64;
MGFYEHFINM VWNLISNNWY SVLVNGQSSG FFKSTRGVKQ GDPLSPALFT LSAEVLSRSL
NKLFEDKSFV GFGMPKWSDP LNHLAYADDT IIFASAHPPS LSKIMAVLGN YEKISGQMIN
KDKSSYYMHS KVANGLFQAV GAITGFARGK FPFTYLGCPI FYTRRRKDYY EDLIKKVKAK
LHSWKGELLS FGGKATLISS VLQSIPVHML SVLDPPNNIL QHLHKTFARF FWSTKEEERS
RHWALWQNLC LPKEEGGLVF SSLHDVSRAM FAKLWWRFRT TKYLWSNFMW NKYCKKELPT
VVHFRGGSHV WRQMLNAREE VEHAIVWELK SGTTNIWHEN WTGLGALYHI LPEDFPINED
LQEVVELRQG EAWDDQLEGY WDRPYWMPTP SGKFSVSSAW QILRHKADPN QEFKLMWIKD
YKALVVCLVL SKIKATISSS TSYHHLGALK EKKCRVTWKL LFHGWYKYNT DGDSKGNPGP
SSLGFCVRDN EGDVVYAREV DLGVTTNVVA EAKAILQGLE RCVEHDLHPL ILETDSLVMK
KNDVYIKGSS REGSELTRSQ KGIVSKPGLC LAKLA
//
