ID A0A1S4CFQ3_TOBAC Unreviewed; 635 AA.
AC A0A1S4CFQ3;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Factor of DNA methylation 1-like isoform X2 {ECO:0000313|RefSeq:XP_016499946.1, ECO:0000313|RefSeq:XP_016499947.1};
GN Name=LOC107818442 {ECO:0000313|RefSeq:XP_016499946.1,
GN ECO:0000313|RefSeq:XP_016499947.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016499946.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016499946.1, ECO:0000313|RefSeq:XP_016499947.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016499946.1; XM_016644460.1.
DR RefSeq; XP_016499947.1; XM_016644461.1.
DR GeneID; 107818442; -.
DR OMA; ERNECNS; -.
DR OrthoDB; 1112799at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0009381; F:excinuclease ABC activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005379; FDM1-5/IDN2_XH.
DR InterPro; IPR001162; UvrC_RNase_H_dom.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR21596:SF3; FACTOR OF DNA METHYLATION 1-RELATED; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03469; XH; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
DR PROSITE; PS50165; UVRC; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT DOMAIN 344..497
FT /note="UvrC family homology region profile"
FT /evidence="ECO:0000259|PROSITE:PS50165"
FT REGION 347..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 383..469
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 347..364
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 635 AA; 74075 MW; B5EF1198EF24FD35 CRC64;
MSSSSDEEVE LSDSEIYEFK EKPYEELRTE KLRVKGPNGS LRCPFCAGKK KQDYKYKDLL
QHATGVGKGS ANRRAKQKAN HLALAKYLQT DLVNEVEPIP ARAVTPERSE PEKTELFCWP
WTGVVVNISK EAANGRSLDD KEYWLRKFSI YIPSEAKFFY DNQARVSEAI VRFNSDWTGF
KGAMEFEMSF ETSHCSKREW KADRSCPGPN IYGWVAREDD YIAEGAVGEY LREKGKLKKI
SDLINEETHD KKKVVANLAN EIDMKNENLD ELQTRFNLNT LSLSQMLEEK DMLHHAFFEE
SRKMQRLARE HVQKVLLEQE MLSVELESKK KKLDAWSREL NKREALTERE KQKLDDEKKQ
NDERNSALQM ASVEQRKADE NVLRLVEEQK REKEKALRKI LELEREIDAR QKLEMEIAEF
KGKLEVMKHL GSNDDAAVQN KIKEMNEELK QKMEEMDDME SLNQTLLAKE RQSNDELQDA
RHALIDGLKE MLTSGRSQIG IKRMGEIDAK AFQNALKQRL PSAEADIKAL ELCSLWQEKL
KAQDWHPFKT VMVDESRVER VIDENDEALE KLKEEWGDEI YNAVTTALKE IEEYNPSGRY
IINELWNFKE GRKATLKEVT SYIFKQLKTH KRKRP
//
