ID A0A1S4CQC5_TOBAC Unreviewed; 853 AA.
AC A0A1S4CQC5;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Zinc finger CCCH domain-containing protein 44-like isoform X1 {ECO:0000313|RefSeq:XP_016503452.1};
GN Name=LOC107821538 {ECO:0000313|RefSeq:XP_016503452.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016503452.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016503452.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016503452.1; XM_016647966.1.
DR AlphaFoldDB; A0A1S4CQC5; -.
DR SMR; A0A1S4CQC5; -.
DR STRING; 4097.A0A1S4CQC5; -.
DR PaxDb; 4097-A0A1S4CQC5; -.
DR GeneID; 107821538; -.
DR KEGG; nta:107821538; -.
DR OMA; NEQRGRN; -.
DR OrthoDB; 50760at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd00072; GYF; 1.
DR CDD; cd15568; PHD5_NSD; 1.
DR Gene3D; 3.30.1490.40; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR003169; GYF.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46695:SF15; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR46695; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED; 1.
DR Pfam; PF02213; GYF; 1.
DR Pfam; PF13771; zf-HC5HC2H; 1.
DR SMART; SM00444; GYF; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF55277; GYF domain; 1.
DR PROSITE; PS50829; GYF; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 71..137
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 337..390
FT /note="GYF"
FT /evidence="ECO:0000259|PROSITE:PS50829"
FT REGION 31..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 398..430
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 537..557
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 572..598
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 622..690
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 800..853
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..425
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 650..674
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 853 AA; 92768 MW; 719DF97A1553138A CRC64;
MAESQPIGAP IAVAGDTMLA TVNNTPIPVT MEVSTSATIG SEKRKRGRPP RGQAGKPPPP
KIQRVEEDEE EDVCFICFDG GSLVLCDRKG CPKAYHPACI KRDEEFFSSN AKWFCGWHIC
SVCQKASHYL CYTCTYSLCK GCIKNADYFC VRRNKGFCSM CMRTIMLIEN NDQGNNGTVQ
VDFDDKGSWE YLFKLYWVYL KEKLSLTLSE LAQAKNPWKE SDRIHGELQY SHHVTNVKEQ
GSTMAQCQMK EKQEAHGTNR LEKLGNRATV DQAFKEQGSI MAQCEMSEKT DTHGTNILEK
LGDRATVDQA VDGSGSETSI ASLSTANSAS TNISETDEVW HYRDPTGKTQ GSFSMIQLRK
WSKLGLFPLD MRIWTNDEYD DSVLLTDALN GLLHKAPPVH GKTSSRSQEL GAASADRNVS
ERCGRSTGTG RECREMEVPC HRASKDLNGN AENARIDGLS APFPKFLDLM NGSNPYSDKL
QLCSPVPSSR HGEVHVALPS KERGHENVEL HSARGQVIQD SCGSTMCQIT ESYNRKAQSN
NQSYVGQSSG QNWGSSTSCR SSINLDTGFA SGTNSKESFE QKGNVNLSDR PSPTANTSYD
DIEAQAAEKL LSLSSGVPLR ASDIHDWSTS TPKSYGEAKA GRAAENKASA PSKLSVQDSG
PSWSSGSSLA DECDGNTPTA EPSAEEWDSG LVSVSSLKPA EAVSDHVATP TPVADQLNYT
SPSLQVSNLS NWQAAVNEPI EFSTLAEESV SDLLAEVDAM ESQTQSGMGS PTSAMRFSEQ
MIPGYKNFIL ALFEDLSPTP DPAKSDGLSS NGDIKLPCQS PVTDELVGAS QADAFDPLKR
SDGNSSNEQR NRN
//
