ID A0A1S4DC52_TOBAC Unreviewed; 440 AA.
AC A0A1S4DC52;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Zinc finger CCCH domain-containing protein 48 {ECO:0000313|RefSeq:XP_016511012.1};
GN Name=LOC107828246 {ECO:0000313|RefSeq:XP_016511012.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016511012.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016511012.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016511012.1; XM_016655526.1.
DR AlphaFoldDB; A0A1S4DC52; -.
DR STRING; 4097.A0A1S4DC52; -.
DR PaxDb; 4097-A0A1S4DC52; -.
DR GeneID; 107828246; -.
DR KEGG; nta:107828246; -.
DR OMA; LATYQCV; -.
DR OrthoDB; 363481at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.210; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR44489; -; 1.
DR PANTHER; PTHR44489:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 63; 1.
DR Pfam; PF00400; WD40; 3.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 25..51
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 114..141
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT REPEAT 152..193
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 274..313
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT ZN_FING 25..51
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 114..141
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 50..106
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 54..76
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 440 AA; 48425 MW; CC930EE5E0F9FB69 CRC64;
MDMDGSKRIF QRLGPHSQGG DNNSNKQQKV CFHWRAGRCN RFPCPFLHRE LPAPPHQQQQ
QPHNGMPSSS SKRPHAFSSD YDNRGSAGGG GMRRNPNFNN TWGRTAAGGG AVVRKMEKVC
NYWVKGNCTY GNTCRFLHSW TTGDCFTLLT QLEGHQKVVT GIALPSGSDK LYSGSTDKTV
RVWDCQSGQC AGVVNFDGEV GCMLSEGPWI FVGLTNLVKA WNTQTGTDLS LDGPVGQVYA
LVVGNDMLLA GTEDGILAWK YNGSTNCFEP AAQLKEHTHH VVSLVVGANR LYSGSMDNSI
RVWNLETMQC LQILTGHTSV VMSVLCWDQF LLSCSLDQTI KVWAANESGN LEVTYTHQEE
KGVLALCGMH DSEAKPVLLC SCNDKTIHVY DLPSFSERGK IFSKEVVRRI EIGPGGLFFT
GDESGQLRVW KWLTESSSTA
//
