ID A0A1S4DCJ6_TOBAC Unreviewed; 337 AA.
AC A0A1S4DCJ6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=MYB transcription factor {ECO:0000256|ARBA:ARBA00032813};
GN Name=LOC107828351 {ECO:0000313|RefSeq:XP_016511126.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016511126.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016511126.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_016511126.1; XM_016655640.1.
DR AlphaFoldDB; A0A1S4DCJ6; -.
DR SMR; A0A1S4DCJ6; -.
DR STRING; 4097.A0A1S4DCJ6; -.
DR PaxDb; 4097-A0A1S4DCJ6; -.
DR GeneID; 107828351; -.
DR KEGG; nta:107828351; -.
DR OrthoDB; 207546at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0000786; C:nucleosome; IEA:InterPro.
DR GO; GO:0003691; F:double-stranded telomeric DNA binding; IEA:InterPro.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IEA:UniProt.
DR GO; GO:0010597; P:green leaf volatile biosynthetic process; IEA:UniProt.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR CDD; cd11660; SANT_TRF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005818; Histone_H1/H5_H15.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR044597; SMH1-6.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46267; SINGLE MYB HISTONE 4; 1.
DR PANTHER; PTHR46267:SF8; TELOMERE REPEAT-BINDING FACTOR 1; 1.
DR Pfam; PF00538; Linker_histone; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SMART; SM00526; H15; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51504; H15; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051}.
FT DOMAIN 20..72
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 20..48
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 135..203
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT REGION 98..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 261..306
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 337 AA; 37520 MW; EDC619AA506154D4 CRC64;
MVNGLFWELH FLDALMGAPK LKWTPEEEVA LRAGVLKYGP GKWRTILKDP EFSGVLYLRS
NVDLKDKWRN MTVMANGWGS REKAKLALKR MIQAPMQGES SAAVTSEAES DAEIPEAWPA
TTSRGSPQHG GSRRSILRLD NLIMEAISNL NEPGGSYQAT ISTYIEDQYW ETPNIRRLLS
AKLKYLTATG KLIKMKRKYK VAPKLTFANK RRNLPLPLLD SSQRICSKVD QDDINMLTRS
QIDLDLEKMK NMSPQEAAAA AAQAVAEADT ATAEAAEAAR KAEAAAAEAE AAQAFAEAAM
KTLQERSIPR MVRHFPLSFL SFLFPFPLSL ESFWVNV
//
