ID A0A1S4DMF6_TOBAC Unreviewed; 366 AA.
AC A0A1S4DMF6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=High mobility group B protein 9-like {ECO:0000313|RefSeq:XP_016514602.1};
GN Name=LOC107831352 {ECO:0000313|RefSeq:XP_016514602.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016514602.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016514602.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016514602.1; XM_016659116.1.
DR AlphaFoldDB; A0A1S4DMF6; -.
DR SMR; A0A1S4DMF6; -.
DR STRING; 4097.A0A1S4DMF6; -.
DR PaxDb; 4097-A0A1S4DMF6; -.
DR GeneID; 107831352; -.
DR KEGG; nta:107831352; -.
DR OMA; HILYVEV; -.
DR OrthoDB; 5001776at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd16872; ARID_HMGB9-like; 1.
DR CDD; cd22009; HMG-box_AtHMGB9-like; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR045303; ARID_HMGB9-like.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46691:SF1; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2; 1.
DR PANTHER; PTHR46691; HIGH MOBILITY GROUP B PROTEIN 9; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF09011; HMG_box_2; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051}.
FT DOMAIN 105..196
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 290..357
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 290..357
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 248..296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 248..264
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 273..287
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 366 AA; 42159 MW; 5FC78FDF12746A4A CRC64;
MNKLSLCQKF NVLCLCPLRF NSREKEEEEE AKVRKLSLHI TVASTRVSKT PSFYCLLKLQ
LAECVISRRR QGEPMSQKAM VPAGTGNRNG GQLYPQPLAS HENIVNDQNL FRECVKNFHS
VMGTKYTVPV IGGKELDLHV LYVEVTKRGG FDKVVDEKKW RELSSVFKFS PTTTSASYAL
RKHYFTLLHR FEQVYFFRRE APLLDKTPAS QSFQAEGTID GKFDCGYLVS IKMGSEVLNG
VLYHPNQPAA PSSSKPTAQN CTAIVPYNPP PHHHSGRRNR RRKGGDPNRP KPNRSGYNFF
FAEKHSMLKS LYPSREREFT KMIGESWNNL SPEEKMVYQN YGVKDKERYQ KEMKEYKERM
QITSCY
//
