ID A0A1S8BM09_9PEZI Unreviewed; 1150 AA.
AC A0A1S8BM09;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=PAB-dependent poly(A)-specific ribonuclease subunit PAN2 {ECO:0000313|EMBL:OMP88610.1};
DE Flags: Fragment;
GN ORFNames=BK809_0005329 {ECO:0000313|EMBL:OMP88610.1};
OS Diplodia seriata.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetes incertae sedis; Botryosphaeriales; Botryosphaeriaceae;
OC Diplodia.
OX NCBI_TaxID=420778 {ECO:0000313|EMBL:OMP88610.1, ECO:0000313|Proteomes:UP000190776};
RN [1] {ECO:0000313|EMBL:OMP88610.1, ECO:0000313|Proteomes:UP000190776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F98.1 {ECO:0000313|EMBL:OMP88610.1,
RC ECO:0000313|Proteomes:UP000190776};
RA Robert-Siegwald G., Vallet J., Abou-Mansour E., Xu J., Rey P., Bertsch C.,
RA Rego C., Larignon P., Fontaine F., Lebrun M.-H.;
RT "Draft genome sequence of Diplodia seriata F98.1, a fungal species involved
RT in grapevine trunk diseases.";
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMP88610.1}.
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DR EMBL; MSZU01000074; OMP88610.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1S8BM09; -.
DR STRING; 420778.A0A1S8BM09; -.
DR OrthoDB; 9810at2759; -.
DR Proteomes; UP000190776; Unassembled WGS sequence.
DR GO; GO:0031251; C:PAN complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IEA:InterPro.
DR CDD; cd06143; PAN2_exo; 1.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR HAMAP; MF_03182; PAN2; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR030843; PAN2.
DR InterPro; IPR048841; PAN2_N.
DR InterPro; IPR028881; PAN2_UCH_dom.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR028889; USP_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR15728; DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2; 1.
DR PANTHER; PTHR15728:SF0; PAN2-PAN3 DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2; 1.
DR Pfam; PF20770; PAN2_N; 1.
DR Pfam; PF00929; RNase_T; 1.
DR Pfam; PF13423; UCH_1; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50235; USP_3; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000190776};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574}.
FT DOMAIN 481..825
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 379..430
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 915..939
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1111..1150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 405..430
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OMP88610.1"
SQ SEQUENCE 1150 AA; 128094 MW; ED4D6DACBCD821F5 CRC64;
LSQIPLPPPG PHAMPTPATT VAFDTHQDLL WSGNDYGRVS SFFGPELQRY TSYRAHPSGE
GAVKQLLFCD KGVLSISVRS VHLASRRGVT QWHLTNEGFK DLRCMSFTSK GVYEVLVAGC
QDSMFRIDVE KGTITATLPA ENSYTMMKKG GQYICAATTA GMVQIIDPSS FKIVKSWQAH
KEWINDMDAK SDFLVTCGFS RRQMNNLILD PFAYVYDLKT LLPLPPIPFH VGAAFVRMHP
RMSTTSIVAS QSGQLQVVDL MNPNTANVRQ VNLYETYLTC LEMAPSGEAL ALTDALCSVR
IWGSPTKVRF TDQSQPTEFP DHGIPPPKLD WSMDTPLSTI GMPYYRETLL SVWPSHMIFE
VGAPPPKLDS QVSTSLKRAE MGQWAPNPRK TRRNQVQATR MLEKDNPLKP PKFLSEKARD
GNAGKDGERR MSETLEALTD LMLDGSTKKD VPVMYRNVEI KYSKFGVDDF DFKYYNKTEY
SGLETHIANS YANPLLQLFR FTPLVRNLAL HHAATSCLFE NCLLCELGFL IDMLEKACGQ
NCQATNFLKT FSGLSNAASL GLLEEHSPNS SLTIMIQNLN RFLLDKLTAD FRQMAQGVGH
LDHAFTTNAV ANIRCAQCNN ETRRPGASLV HELVYPPKNT MKNPMRASRP TFSQILKASV
ERQDQNRGWC DRCKRYQQLA ARKTIQNIPP ILMINAAIHS HEAKQLWATP NWLPEKIGII
VNQGQFFCYE GQDLEHHLRR NFYDIQVYEL IGVVADINSG ENQKSHLVSM INVAPSSRNE
EEAAEGGSGK WHLFNDFLVR PVSKEEALRF EPNWKLPSVL TYESVKASHH IDDSWKENLD
TSLLYRTWGP AGEMSDNSDF KPLHPSEHPG PGWPVAIDAE FVSLQREEIE ISASGQRETI
RPSRLGLARV SVLRGGDSST TSGGDIDSEN GDEIDNNSDE GKPFIDDYIA IAEPIVDYLT
LFSGISPGDL DRSTSRHALV GLKVAYKKLW LLLNLGCVFV GHGLPKDFRT INIHVPKAQV
VDTVDLYFIP ARQRKLSLRF LAWVVLEEDI QQDTHDSVED ARTALKLWKH WRDVEAAEGR
GVCEEMVRDI YKRGWEVGFK VPGSAGVAAG GAGAGGGAAT PTRMTPVRPG TGGWKPPPGG
VSFGSPSPMK
//
