ID   A0A1T1AP82_RHOFE        Unreviewed;       813 AA.
AC   A0A1T1AP82;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:OOV05884.1};
GN   ORFNames=RF819_03395 {ECO:0000313|EMBL:OOV05884.1};
OS   Rhodoferax fermentans.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Rhodoferax.
OX   NCBI_TaxID=28066 {ECO:0000313|EMBL:OOV05884.1, ECO:0000313|Proteomes:UP000190750};
RN   [1] {ECO:0000313|EMBL:OOV05884.1, ECO:0000313|Proteomes:UP000190750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 7819 {ECO:0000313|EMBL:OOV05884.1,
RC   ECO:0000313|Proteomes:UP000190750};
RA   Kim Y.J., Farh M.E.-A., Yang D.-C.;
RT   "Genome sequencing of Rhodoferax fermentans JCM 7819.";
RL   Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OOV05884.1}.
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DR   EMBL; MTJN01000002; OOV05884.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1T1AP82; -.
DR   STRING; 28066.RF819_03395; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000190750; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000190750}.
FT   DOMAIN          692..761
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          763..801
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   813 AA;  87763 MW;  284AC282FFBF159D CRC64;
     MQKIIAQLAQ EIRVQERQVA AAVELLDGGA TVPFIARYRK EVTGGLDDIQ LRELEARLSY
     LRDLRDRRAA VIKSIDEQGK MTPALLAALL AAPTKQELED LYLPFKQKRR TKGQIAREAG
     IEPLADALFA DPILDPAAQA QAYVKPEKTE AGDDFTTVQA VLDGVRDILS ERWAEDAALV
     QDLRGWLWEQ GLFKSSLMVG KNESDPEVAK FRDYFDYDEP IARVPSHRAL AVFRGRSLEI
     LETKLVLPEP PVASVQASNQ PSALSDKGSA VTKTRATPVV SLAEGRIALK LGWSHKGRAA
     DDLIRKCVAW TWRVKLSLST ERDLFARLRE ASEAVAIKVF ADNLRDLLLA APAGPRVVLG
     LDPGIRTGVK VAVVDATGKL VDTSTVYPHE PRKDWDGSLH VLAALCQRHG VNLIAIGNGT
     ASRETDKLAA DLIKLMAKSP AAQNGQGQVA IEKVVVSEAG ASVYSASEFA SQEMPDVDVS
     LRGAASIARR LQDPLAELVK IDPKSIGVGQ YQHDVNQSEL AKTLEAVVED CVNSVGVDLN
     MASVPLLSRV SGLSAGVAKA VVRWREANGA FASRQDLLKV TGLGAKTFEQ CAGFLRIRGG
     SNPLDMTGVH PETYPVVEQI LAKTGREVAE LMGRAEMLKT LRPELFANEK FGVITVKDIL
     AELEKPGRDP RPDFKVARFN DGVEDIRDLK EGMILEGTVS NVAAFGAFVD LGVHQDGLVH
     VSQLAHKFVN DAREVVKTGD IVKVQVVEVD VARKRIALTM KLGTPPARSG AAGDNRFQGA
     SAQQRARGAG AAAHAPQSTA MSSAFAKLKG LGN
//