ID A0A1T2KXY6_9GAMM Unreviewed; 158 AA.
AC A0A1T2KXY6;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:OOZ37630.1};
DE Flags: Fragment;
GN ORFNames=BOW52_10120 {ECO:0000313|EMBL:OOZ37630.1};
OS Solemya elarraichensis gill symbiont.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; sulfur-oxidizing symbionts.
OX NCBI_TaxID=1918949 {ECO:0000313|EMBL:OOZ37630.1, ECO:0000313|Proteomes:UP000190198};
RN [1] {ECO:0000313|EMBL:OOZ37630.1, ECO:0000313|Proteomes:UP000190198}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sp-SM6 {ECO:0000313|EMBL:OOZ37630.1};
RA Russell S.L., Corbett-Detig R.B., Cavanaugh C.M.;
RT "Mixed transmission modes and dynamic genome evolution in an obligate
RT animal-bacterial symbiosis.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OOZ37630.1}.
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DR EMBL; MPRK01000273; OOZ37630.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1T2KXY6; -.
DR OrthoDB; 9797134at2; -.
DR Proteomes; UP000190198; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF58; BLL3014 PROTEIN; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023082};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023082}.
FT DOMAIN 21..82
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 110..158
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT NON_TER 158
FT /evidence="ECO:0000313|EMBL:OOZ37630.1"
SQ SEQUENCE 158 AA; 18375 MW; D269337367F97695 CRC64;
MAIIDRLCAA RALKHRIAER RGRLFRVAYA WCKDRHLADD LVQEAIERAI NKCHQLKDPS
RLDSWLYSVL NNCWREHLRM RREHVALNDD DLVCTNCPER QNTSGELAAR VMVLIGLLPD
NQRQVLTLVV LEEFSYREVA EILDIPVGTV MSRLSRAR
//
