ID A0A1T2LC09_9GAMM Unreviewed; 736 AA.
AC A0A1T2LC09;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=ATP-dependent RNA helicase HrpA {ECO:0000313|EMBL:OOZ42638.1};
DE Flags: Fragment;
GN ORFNames=BOW52_02140 {ECO:0000313|EMBL:OOZ42638.1};
OS Solemya elarraichensis gill symbiont.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; sulfur-oxidizing symbionts.
OX NCBI_TaxID=1918949 {ECO:0000313|EMBL:OOZ42638.1, ECO:0000313|Proteomes:UP000190198};
RN [1] {ECO:0000313|EMBL:OOZ42638.1, ECO:0000313|Proteomes:UP000190198}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sp-SM6 {ECO:0000313|EMBL:OOZ42638.1};
RA Russell S.L., Corbett-Detig R.B., Cavanaugh C.M.;
RT "Mixed transmission modes and dynamic genome evolution in an obligate
RT animal-bacterial symbiosis.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OOZ42638.1}.
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DR EMBL; MPRK01000021; OOZ42638.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1T2LC09; -.
DR Proteomes; UP000190198; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:OOZ42638.1};
KW Hydrolase {ECO:0000313|EMBL:OOZ42638.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 81..244
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 273..440
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT NON_TER 736
FT /evidence="ECO:0000313|EMBL:OOZ42638.1"
SQ SEQUENCE 736 AA; 84148 MW; 5C57BD50EBF0B9B5 CRC64;
MKLPDQKQFN ACLLTDRYRL RRRSHALQKL QQSGSLDSDA VLKLTKEVNA SAAIASQRLQ
TEFDLNYPAD LPVAQRVDEI SKTIRENQVT ILCGETGSGK STQLPKICLE LGYGHYGRIG
HTQPRRIAAR SLASRIASEL NTESGQLVGY RVRFKDHLQT HTRIKLMTDG ILLAEIQQDP
WLNQYDLLII DEAHERTLNI DFLLGYLKRL LPKRPDLKLI ITSATIDPER FSEHFDQAPI
IMVSGRTWPV EVRYQPPEEE QGTAERDEGV QQAIVDALDE LACEDRGDVL VFLSGEREIR
ETAETLRKHH MDNTQVLPLY ARLSPAEQSK IFNPSGLRRI ILSTNVAETS LTVPGIRHVV
DTGFARISRY SHRSKVQRLP VERVSQASAN QRKGRCGRVA EGICIRLYSE DDFESRREFT
EPEIPRTNLA SVILQMQLMG VGKIEGFPFI DAPDNRLIKD GYLVLSELGA VTPDRKVTRI
GKQLARLPVD PRIGRMLLEA AHTHCLNELL VIAAALSVQD PRMRPLEKQQ ASDEAHALFQ
DELSDYMAIL NLWRHLEEQK RHLSRRKFNN HCRDRYLSST RVQEWFDIHH QLRGQMHEMS
YKENMAEAGY EEIHKAILSG LLSHIGFRHS GKEMDYLGAR NSRFHLFPGS GVFKKRPKWV
VAAELVETTR LYARGVASVE PQWIESMAGH LLKRSYSEPH WQKKRGQVGT YEKVTLYGLT
LVQRRRINYG PIDPDL
//