ID A0A1T4LJI5_9BACT Unreviewed; 1117 AA.
AC A0A1T4LJI5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:SJZ54903.1};
GN ORFNames=SAMN04488132_102531 {ECO:0000313|EMBL:SJZ54903.1};
OS Sediminibacterium ginsengisoli.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Sediminibacterium.
OX NCBI_TaxID=413434 {ECO:0000313|EMBL:SJZ54903.1, ECO:0000313|Proteomes:UP000190888};
RN [1] {ECO:0000313|EMBL:SJZ54903.1, ECO:0000313|Proteomes:UP000190888}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22335 {ECO:0000313|EMBL:SJZ54903.1,
RC ECO:0000313|Proteomes:UP000190888};
RA Peterson S.W.;
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
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DR EMBL; FUWH01000002; SJZ54903.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1T4LJI5; -.
DR STRING; 413434.SAMN04488132_102531; -.
DR Proteomes; UP000190888; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR011662; Secretin/TonB_short_N.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13715; CarbopepD_reg_2; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF07660; STN; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Reference proteome {ECO:0000313|Proteomes:UP000190888};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 68..117
FT /note="Secretin/TonB short N-terminal"
FT /evidence="ECO:0000259|Pfam:PF07660"
FT DOMAIN 227..330
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 540..1075
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 1117 AA; 121827 MW; 9400122784473252 CRC64;
MELTIPRKAG PLPAFTKPKK MLMMRMIIVM LSVCLQVSAG SFSQSVTLSV KNASLESVLR
KVKKQTGYDF FFETRLIRQA GNVSLAVKNQ PLTNVLDACF SGQPVAYKIA DKTIIVTERE
SSPAPSAPIP PPLPPLTVKG KVTDEKGNPV EGAGVLVKGS NNGTTTNASG EWELRNVPDN
ATLIFSYVGY NTLELPVNGK TSINASLTAV NAPLEQIVVI GYGAQRKRDL TGSITTVKGD
DLARMPATNP VASLQGKVAG LTVINSGRAG SSPTVRIRGV NSTNNSDPLF VVDGIFQTNI
DYLNPADIES MEVLRDPSSI AIFGLLGGNG VIIVTTKRAA KGKTRVSLQS SVGIQHVTNK
IDVTDAAGFK KLYNAQLANL NAQPFDYTNY TANTDWQSLI LRDAVLTSHS LNISNSSDKS
TTLLNIGYNN QDGVLKYDNY QKYIVRLNEE IRLNKNIRVG GDLTGFHWIQ QAPGADLNNA
LWAAPIVPIQ IDAKTYYSMP SFQRAQVGNP VAALNRNNKT SINKGYRIVG SLFAEVKFLS
NFTFKSSVYT DLGFNNSRSY TPLPFSFVNL GEGTIPTNTT YDQAARTSVT QTQAEFRKYQ
QDHTLTFDKT ISNDHRLTLL AGFTTLYSAS TNITGNRRDT LLNIPNDPAF WYLGIANASN
PGTFGGGGGE DSYMSFLGRA SYAFKNKYLL NLTFRRDGTS KFAPDKRWGN FSSVGAGWVV
TEETFAKNIK LFDFFKIRAA WGQVGNAMGT GSSLYLPVLN TSSIGVFGNN VYSSVTPAYV
PDPNLHWEVV NGTDIGLEFR MLNNRLNADI NYYNRTTKDI LTFITLPGSA GSYSYYTNLG
NISNKGLEVS LGWRDKIGKD LNYNITANFS YNKNNVESIG NNITFQLIGN NGANKTETGQ
SIGYFYGYRQ VGVYQSTADL DKVPHMANSL PGDIAYADVD GDGAITPADR TYLGTPFPKF
NFGVNIGLSY KQFDASLEGQ GVAGNKVYTQ RRTATFATLN YETNRLNAWT GPGTSNVEPI
LDNTRANNFL FSNYYLEPGD YFRIRTVQLG YTFGAKALSN IGVQQLRLYL SAQNLHTFSR
TTGYTPEAGL GSPIASGADN GTYPIPAIYS FGLNLTF
//