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Database: UniProt
Entry: A0A1T5AL72_9FLAO
LinkDB: A0A1T5AL72_9FLAO
Original site: A0A1T5AL72_9FLAO 
ID   A0A1T5AL72_9FLAO        Unreviewed;       730 AA.
AC   A0A1T5AL72;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   08-MAY-2019, entry version 10.
DE   RecName: Full=Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895};
DE            Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};
DE            EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};
GN   Name=rnr {ECO:0000256|HAMAP-Rule:MF_01895};
GN   ORFNames=SAMN05660866_01077 {ECO:0000313|EMBL:SKB35762.1};
OS   Maribacter arcticus.
OC   Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Maribacter.
OX   NCBI_TaxID=561365 {ECO:0000313|EMBL:SKB35762.1, ECO:0000313|Proteomes:UP000190339};
RN   [1] {ECO:0000313|EMBL:SKB35762.1, ECO:0000313|Proteomes:UP000190339}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 23546 {ECO:0000313|EMBL:SKB35762.1,
RC   ECO:0000313|Proteomes:UP000190339};
RA   Peterson S.W.;
RL   Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: 3'-5' exoribonuclease that releases 5'-nucleoside
CC       monophosphates and is involved in maturation of structured RNAs.
CC       {ECO:0000256|HAMAP-Rule:MF_01895}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Exonucleolytic cleavage in the 3'- to 5'-direction to
CC         yield nucleoside 5'-phosphates.; EC=3.1.13.1;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_01895,
CC         ECO:0000256|SAAS:SAAS01124678};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01895,
CC       ECO:0000256|SAAS:SAAS00089931}.
CC   -!- SIMILARITY: Belongs to the RNR ribonuclease family. RNase R
CC       subfamily. {ECO:0000256|HAMAP-Rule:MF_01895}.
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DR   EMBL; FUYL01000002; SKB35762.1; -; Genomic_DNA.
DR   BioCyc; GCF_900167935:B5X55_RS05350-MONOMER; -.
DR   Proteomes; UP000190339; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008859; F:exoribonuclease II activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_01895; RNase_R; 1.
DR   InterPro; IPR011129; CSD.
DR   InterPro; IPR040476; CSD2.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR013223; RNase_B_OB_dom.
DR   InterPro; IPR001900; RNase_II/R.
DR   InterPro; IPR022966; RNase_II/R_CS.
DR   InterPro; IPR004476; RNase_II/RNase_R.
DR   InterPro; IPR011805; RNase_R.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF17876; CSD2; 1.
DR   Pfam; PF08206; OB_RNB; 1.
DR   Pfam; PF00773; RNB; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00357; CSP; 2.
DR   SMART; SM00955; RNB; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; SSF50249; 4.
DR   TIGRFAMs; TIGR00358; 3_prime_RNase; 1.
DR   TIGRFAMs; TIGR02063; RNase_R; 1.
DR   PROSITE; PS01175; RIBONUCLEASE_II; 1.
DR   PROSITE; PS50126; S1; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000190339};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01895,
KW   ECO:0000256|SAAS:SAAS00462075};
KW   Exonuclease {ECO:0000256|HAMAP-Rule:MF_01895,
KW   ECO:0000256|SAAS:SAAS00089915};
KW   Hydrolase {ECO:0000256|HAMAP-Rule:MF_01895,
KW   ECO:0000256|SAAS:SAAS00446781};
KW   Nuclease {ECO:0000256|HAMAP-Rule:MF_01895,
KW   ECO:0000256|SAAS:SAAS00462054};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01895,
KW   ECO:0000256|SAAS:SAAS00462035}.
FT   DOMAIN      644    725       S1 motif. {ECO:0000259|PROSITE:PS50126}.
SQ   SEQUENCE   730 AA;  84474 MW;  3FA23CC63F95D0DD CRC64;
     MSKRNKKANN HRKNEITKGI FTVLEKEPSK SFNYKQIAAK IDITDAQDRN ILIKRLTELK
     EKKRIEEVDR GQYKVLENTK SYHEGTVDIT GKGNAYIVVE GMDDDIFIPS NKINKAFHKD
     KVEVYIYPRS KSKKLEGEIV RVLERYKTTF VGIVDMQKTF AFVRPTDFRM YTDIFVSKDK
     LGDAKDGEKV LVEITDWPDN VDSPFGRVTE VLGIPGEHDT EIHSILAEYG LPYSFPAEVQ
     RFADGLDTSI KKEEILKRRD VRDVLTFTID PKDAKDFDDA LSFQKLDNGN YEIGIHIADV
     SHYLEKETIL DDEAYERATS VYLVDRVVPM LPEVLSNNAC SLRPNEEKYT FSAIFELDDS
     TMIRNQWFGR TVINSNERFA YEEAQHIIET GNGLIPQDIS IRDTFYTVSN EVVEATLIMD
     RLAKIMRDKR MDQGALSFDK VEVRFNLDEN SEPIGVYFKE SKDANKLIEE FMLLANRKVA
     EFIGKQKPKK TFVYRVHDDP DPDKLMALNG IVSKFGHKLD FKDKKSISSS LNQLLQDVKG
     KKEQNMVDTL TIRSMSKAIY TIDNIGHYGL AFDYYTHFTS PIRRYPDVMV HRLLQHYLDG
     GSSAKEEEFQ KKCKHSSDME YLASSAERDS IKYMQIKFMQ DHKDEEFRGV ISGVTEWGIY
     VEIIDNKCEG MIRIRDIKGD YYIFDEKQYA IVGERTKKKY TLGDEITVMV KSTDLIKRHL
     DFALIPDEKK
//
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