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Database: UniProt
Entry: A0A1T5BPC0_9FLAO
LinkDB: A0A1T5BPC0_9FLAO
Original site: A0A1T5BPC0_9FLAO 
ID   A0A1T5BPC0_9FLAO        Unreviewed;       470 AA.
AC   A0A1T5BPC0;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   SubName: Full=23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:SKB48733.1};
GN   ORFNames=SAMN05660866_01784 {ECO:0000313|EMBL:SKB48733.1};
OS   Maribacter arcticus.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Maribacter.
OX   NCBI_TaxID=561365 {ECO:0000313|EMBL:SKB48733.1, ECO:0000313|Proteomes:UP000190339};
RN   [1] {ECO:0000313|EMBL:SKB48733.1, ECO:0000313|Proteomes:UP000190339}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 23546 {ECO:0000313|EMBL:SKB48733.1,
RC   ECO:0000313|Proteomes:UP000190339};
RA   Peterson S.W.;
RL   Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC       superfamily. RNA M5U methyltransferase family. {ECO:0000256|PROSITE-
CC       ProRule:PRU01024}.
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DR   EMBL; FUYL01000004; SKB48733.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1T5BPC0; -.
DR   STRING; 561365.SAMN05660866_01784; -.
DR   OrthoDB; 9804590at2; -.
DR   Proteomes; UP000190339; Unassembled WGS sequence.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR   GO; GO:0034470; P:ncRNA processing; IEA:UniProt.
DR   GO; GO:0001510; P:RNA methylation; IEA:GOC.
DR   CDD; cd02440; AdoMet_MTases; 1.
DR   Gene3D; 2.40.50.1070; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR030390; MeTrfase_TrmA_AS.
DR   InterPro; IPR030391; MeTrfase_TrmA_CS.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   InterPro; IPR002792; TRAM_dom.
DR   InterPro; IPR010280; U5_MeTrfase_fam.
DR   NCBIfam; TIGR00479; rumA; 1.
DR   PANTHER; PTHR11061:SF48; 23S RRNA (URACIL(747)-C(5))-METHYLTRANSFERASE RLMC; 1.
DR   PANTHER; PTHR11061; RNA M5U METHYLTRANSFERASE; 1.
DR   Pfam; PF01938; TRAM; 1.
DR   Pfam; PF05958; tRNA_U5-meth_tr; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS51687; SAM_MT_RNA_M5U; 1.
DR   PROSITE; PS50926; TRAM; 1.
DR   PROSITE; PS01230; TRMA_1; 1.
DR   PROSITE; PS01231; TRMA_2; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW   ProRule:PRU01024};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW   ECO:0000256|PROSITE-ProRule:PRU01024};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW   ProRule:PRU01024}.
FT   DOMAIN          3..63
FT                   /note="TRAM"
FT                   /evidence="ECO:0000259|PROSITE:PS50926"
FT   ACT_SITE        427
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU10015"
FT   ACT_SITE        427
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         301
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         330
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         351
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
FT   BINDING         400
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01024"
SQ   SEQUENCE   470 AA;  54126 MW;  3139B63BF21909BD CRC64;
     MRKKTKREIF ENVTVVDAAA KGKTIGKAPD GRVIFLTNTV PGDVVDVQTT KKRKAYFEGK
     AIKFHSFSDK RVEPVCLHFG VCGGCKWQDM GYEHQLFYKQ KEVENNLRRI GHLDLPELTP
     ILGSKEQYFY RNKMEFSFSD SRWLTLDEIQ SDNQIEDKNA LGFHIPGMWD KILDIKKCHL
     QKDPSNAIRL ETKKFAVKNG LTFFNPRNQY GMLRTLMIRT SSNGEIMVLV QFFENDKEKR
     ELLLNHLSIT FPEITSLLYV INPKQNDTIY DQEIICFAGR DHIFEEMEGL KFKINAKSFY
     QTNSEQAYEL YKITRNFANL KGNELVYDLY TGTGTIAQFV SKKAKKVVGI ESVPEAILDA
     KENALRNEID NVDFFVGDMK NIFNEQFIAQ NGVPDVIITD PPRDGMHKDV VQQILNIAPN
     KVVYVSCNSA TQARDLEMMK DMYVITKVQP VDMFPQTHHV ENVVLLEKKV
//
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