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Database: UniProt
Entry: A0A1T5BQD6_9SPHI
LinkDB: A0A1T5BQD6_9SPHI
Original site: A0A1T5BQD6_9SPHI 
ID   A0A1T5BQD6_9SPHI        Unreviewed;       192 AA.
AC   A0A1T5BQD6;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   SubName: Full=RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:SKB49365.1};
GN   ORFNames=SAMN05660841_00870 {ECO:0000313|EMBL:SKB49365.1};
OS   Sphingobacterium nematocida.
OC   Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Sphingobacterium.
OX   NCBI_TaxID=1513896 {ECO:0000313|EMBL:SKB49365.1, ECO:0000313|Proteomes:UP000190150};
RN   [1] {ECO:0000313|Proteomes:UP000190150}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 24091 {ECO:0000313|Proteomes:UP000190150};
RA   Varghese N., Submissions S.;
RL   Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
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DR   EMBL; FUZF01000002; SKB49365.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1T5BQD6; -.
DR   STRING; 1513896.SAMN05660841_00870; -.
DR   Proteomes; UP000190150; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014327; RNA_pol_sigma70_bacteroid.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02985; Sig70_bacteroi1; 1.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   PANTHER; PTHR43133:SF46; RNA POLYMERASE SIGMA FACTOR SIGY; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SMART; SM00421; HTH_LUXR; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125}.
FT   DOMAIN          132..190
FT                   /note="HTH luxR-type"
FT                   /evidence="ECO:0000259|SMART:SM00421"
SQ   SEQUENCE   192 AA;  22595 MW;  63292EBBD4F9D02C CRC64;
     MDKNNSVKSD LNLLAELRDG SQEALLAIYD RYYDKLFFYA SKGLSDKFII EDLLQDTFTY
     IWEKRTKLIL THSLSTYLHT IVKYKVFQQI KNTLNREEGL SRFGEHLQQT KELTPHQLLE
     NKEALKFLYF KLDELPEKCK EVFILSRIDR LSHKEIADKL GISTKTVENH ITKAVKILNI
     SARVIFILFF SE
//
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