ID A0A1T5EJS5_9SPHI Unreviewed; 282 AA.
AC A0A1T5EJS5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:SKB84008.1};
GN ORFNames=SAMN05660841_02618 {ECO:0000313|EMBL:SKB84008.1};
OS Sphingobacterium nematocida.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Sphingobacterium.
OX NCBI_TaxID=1513896 {ECO:0000313|EMBL:SKB84008.1, ECO:0000313|Proteomes:UP000190150};
RN [1] {ECO:0000313|Proteomes:UP000190150}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 24091 {ECO:0000313|Proteomes:UP000190150};
RA Varghese N., Submissions S.;
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FUZF01000011; SKB84008.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1T5EJS5; -.
DR STRING; 1513896.SAMN05660841_02618; -.
DR OrthoDB; 3211555at2; -.
DR Proteomes; UP000190150; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30173:SF36; ECF-FAMILY RNA POLYMERASE SIGMA FACTOR-RELATED; 1.
DR PANTHER; PTHR30173; SIGMA 19 FACTOR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 2..65
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 99..146
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 282 AA; 32286 MW; 1C228724B5214126 CRC64;
MQKNYNKLLT YAYNIVGSYE DAKDLVQDVL EKYISLDKSD IRHESNFLIK STINHAINFK
TRQSKKEVFG EWLPEPVSFD NADAKLIRDE TASYTMLVLF EYLNPKERAA FILKEGFGYS
HAEIAELLEI STENSRQLLS RANKQLKYSK YSSYTPHSGH SFETVGRYQK ALAQADIVEL
QNLLVNDIKL SADGGTKVQV VSSSKIGKTA TATLLVYVQQ HFLMGKTFTF QFFNHQPAIC
FWEHEKLQNC HILQLSTDGL IQEIYSIVDP DKLKNITKLS HI
//
