ID A0A1T5JF83_9MICO Unreviewed; 907 AA.
AC A0A1T5JF83;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|ARBA:ARBA00012895};
DE EC=5.6.2.2 {ECO:0000256|ARBA:ARBA00012895};
GN ORFNames=SAMN06309945_1483 {ECO:0000313|EMBL:SKC50014.1};
OS Okibacterium fritillariae.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Okibacterium.
OX NCBI_TaxID=123320 {ECO:0000313|EMBL:SKC50014.1, ECO:0000313|Proteomes:UP000190857};
RN [1] {ECO:0000313|EMBL:SKC50014.1, ECO:0000313|Proteomes:UP000190857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM Ac-2059 {ECO:0000313|EMBL:SKC50014.1,
RC ECO:0000313|Proteomes:UP000190857};
RA Peterson S.W.;
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP-dependent breakage, passage and rejoining of double-
CC stranded DNA.; EC=5.6.2.2; Evidence={ECO:0000256|ARBA:ARBA00000185};
CC -!- SIMILARITY: Belongs to the type II topoisomerase GyrA/ParC subunit
CC family. {ECO:0000256|ARBA:ARBA00008263}.
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DR EMBL; FUZP01000001; SKC50014.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1T5JF83; -.
DR STRING; 123320.SAMN06309945_1483; -.
DR OrthoDB; 9806486at2; -.
DR Proteomes; UP000190857; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0034335; F:DNA negative supercoiling activity; IEA:UniProt.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR CDD; cd00187; TOP4c; 1.
DR Gene3D; 3.30.1360.40; -; 1.
DR Gene3D; 2.120.10.90; DNA gyrase/topoisomerase IV, subunit A, C-terminal; 1.
DR Gene3D; 3.90.199.10; Topoisomerase II, domain 5; 1.
DR Gene3D; 1.10.268.10; Topoisomerase, domain 3; 1.
DR InterPro; IPR006691; GyrA/parC_rep.
DR InterPro; IPR035516; Gyrase/topoIV_suA_C.
DR InterPro; IPR013760; Topo_IIA-like_dom_sf.
DR InterPro; IPR013758; Topo_IIA_A/C_ab.
DR InterPro; IPR013757; Topo_IIA_A_a_sf.
DR InterPro; IPR002205; Topo_IIA_dom_A.
DR PANTHER; PTHR43493:SF5; DNA GYRASE SUBUNIT A, CHLOROPLASTIC_MITOCHONDRIAL; 1.
DR PANTHER; PTHR43493; DNA GYRASE/TOPOISOMERASE SUBUNIT A; 1.
DR Pfam; PF03989; DNA_gyraseA_C; 2.
DR Pfam; PF00521; DNA_topoisoIV; 1.
DR SMART; SM00434; TOP4c; 1.
DR SUPFAM; SSF101904; GyrA/ParC C-terminal domain-like; 1.
DR SUPFAM; SSF56719; Type II DNA topoisomerase; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Reference proteome {ECO:0000313|Proteomes:UP000190857};
KW Topoisomerase {ECO:0000256|ARBA:ARBA00023029}.
FT DOMAIN 20..473
FT /note="DNA topoisomerase type IIA"
FT /evidence="ECO:0000259|SMART:SM00434"
FT REGION 843..907
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 851..873
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 881..895
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 907 AA; 96641 MW; C3C08F0A839A6B5D CRC64;
MPRSDKNAPA APINERIEDV DVSAEMQGSF LEYAYSVIYS RALPDARDGL KPVQRRILYQ
MTEMGLRPDR GHVKSARVVG EVMGKLHPHG DSAIYDALVR LAQPFTLRVP LVDGHGNFGS
LDDGPAASRY TEARLEAAAL ALTADLDEDV VDFVPNYDNQ FQQPEVLPAA YPNLLVNGAS
GIAVGMATNM APHNLIEVVG AARHLLEHPD ASLDDLMEFV PGPDLPTGGT IVGLDGIRDA
YATGRGAFKT RARVRIEAIT PRKQGIIVTE LPYLVGPEKV IEKIKDGVNN KKLSGISDVT
DLTDRTNGLQ LVIGIKTGFS PEAVLEQLYR YTPLEDSFSI NNVALVEGGP RTLGLRELLE
VYVKHRISVV TRRSTYRLAR RKERLHLVEG LLIAILDIDE VIQVIRASDD SDQARSRLID
VFDLSQVQAE YILELRLRRL TKFSRIELEA ERDKLLAEIA ELEEILGSTA RLHALVSDEL
EAVAEQFGTP RRTLLTAAKP SIASAGSRKN QPVLELADTP CRIYLSATGR MVRVDYPGEG
GLEPVAAPPR RSKHDAVLSM LETSSRTEVG AVTSLGRLIR FSPLELPVVP PNSVQLGAGV
RIADYITLQP KERVLAVVAL DSAKPIALGT RTGVVKRVTP GDWPNKPEFE IIQLKPKDVV
VAAAPSTDTD EFVFVTSDAQ LLRFAASAVR PQGRTAGGMA GIKLGAGASV LSFHVVRADE
TTRTVVATVA ANTSALAGTD PGSGKVSAFD EFPAKGRATG GVRAQRFLKG EDALVVAWVG
PEPALAVATD GAVRKLPEAL AKRDASGQFL EGVVGYIGAS IATPADAVGA LAAGSDPVPL
TAAERDTADS APSAPSESPE SAVGTTLTVD GAGSEASVQE ALDTPLASSD IPSVPDNGGE
SDDAALF
//