ID A0A1T5NKM3_9BACT Unreviewed; 402 AA.
AC A0A1T5NKM3;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:SKD00906.1};
GN ORFNames=SAMN05660461_1995 {ECO:0000313|EMBL:SKD00906.1};
OS Chitinophaga ginsengisegetis.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Chitinophaga.
OX NCBI_TaxID=393003 {ECO:0000313|EMBL:SKD00906.1, ECO:0000313|Proteomes:UP000190166};
RN [1] {ECO:0000313|EMBL:SKD00906.1, ECO:0000313|Proteomes:UP000190166}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18108 {ECO:0000313|EMBL:SKD00906.1,
RC ECO:0000313|Proteomes:UP000190166};
RA Peterson S.W.;
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FUZZ01000001; SKD00906.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1T5NKM3; -.
DR STRING; 393003.SAMN05660461_1995; -.
DR Proteomes; UP000190166; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR_DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000190166};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..22
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 31..50
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 62..81
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 93..115
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 121..142
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 162..183
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 203..223
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 279..385
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 402 AA; 45806 MW; FA69183EB3E8A949 CRC64;
MKYIILLGAF QAVVVFSIFI IDHKKRSSDN ILSWFLILVF VHLGSGFALH TLFPNAEIHK
QFYTFITLMY SPLLWIYAKH LSGRHLQAGQ KNYYHFLPAM AGAVVYFTIA GYIIVHNGNT
PAAIIYYNQV VGYTAMISFP LYGALSLREA RRIPSFWQSE IWLVRFIATV FILITVLMLA
LVLNNHLPPA SRFNIDQHLW GRIFTYISLL SICLAIGRVR ILFLMDTETP LPLLDYTSPE
TDPAVASAAE TADKETAAGI PQQPRKSLLP EEQQAAIACQ LKQWMYEKTV YKDPELTLDK
LAAAMEISRH HLSETLNQYI GQSFYQFINE YRIREVIKLI DEHRQRKDTP NILSLAFEAG
FHSKSSFNQY FKKVTGNTPS AYMKSKNMMI TMPAGAVKSS LT
//
