ID A0A1U7CS62_9BACT Unreviewed; 203 AA.
AC A0A1U7CS62;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=ECF RNA polymerase sigma factor SigE {ECO:0000313|EMBL:APW61784.1};
GN Name=sigE_16 {ECO:0000313|EMBL:APW61784.1};
GN ORFNames=BSF38_03313 {ECO:0000313|EMBL:APW61784.1};
OS Paludisphaera borealis.
OC Bacteria; Planctomycetota; Planctomycetia; Isosphaerales; Isosphaeraceae;
OC Paludisphaera.
OX NCBI_TaxID=1387353 {ECO:0000313|EMBL:APW61784.1, ECO:0000313|Proteomes:UP000186309};
RN [1] {ECO:0000313|Proteomes:UP000186309}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PX4 {ECO:0000313|Proteomes:UP000186309};
RA Ivanova A.;
RT "Comparative genomics of four Isosphaeraceae planctomycetes: a common pool
RT of plasmids and glycoside hydrolase genes.";
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
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DR EMBL; CP019082; APW61784.1; -; Genomic_DNA.
DR RefSeq; WP_076347408.1; NZ_CP019082.1.
DR AlphaFoldDB; A0A1U7CS62; -.
DR STRING; 1387353.BSF38_03313; -.
DR KEGG; pbor:BSF38_03313; -.
DR OrthoDB; 258490at2; -.
DR Proteomes; UP000186309; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF51; ECF RNA POLYMERASE SIGMA-E FACTOR; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000186309}.
FT DOMAIN 29..97
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 151..187
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT REGION 98..122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..116
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 203 AA; 23224 MW; 0CB87A749B0861DA CRC64;
MDDAPSTHPS FLIRLRDPAD EGAWSEFMEI YGPLVRRIAR HRRLQDADAE DLAQEVFRAV
ARAIERYDPD PEKGSFRAWL SRIARNLIIN LLAARRRHPQ GSGDTDVQRL LEDQPDPTGE
DSAVFDAEYR RTLIMWAADR IRGELSDAAW QAFWQAGVEG RPPKEVAEAL GMSLGTVYQY
KSRAVVRIRR EIEQFGWESA ENS
//
