ID A0A1U7DJZ9_9RHOB Unreviewed; 468 AA.
AC A0A1U7DJZ9; A0A2M9D5A7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:APX90337.1};
GN ORFNames=BV394_11860 {ECO:0000313|EMBL:APX90337.1}, CLV77_3061
GN {ECO:0000313|EMBL:PJJ80790.1};
OS Brevirhabdus pacifica.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Brevirhabdus.
OX NCBI_TaxID=1267768 {ECO:0000313|EMBL:APX90337.1, ECO:0000313|Proteomes:UP000187266};
RN [1] {ECO:0000313|EMBL:APX90337.1, ECO:0000313|Proteomes:UP000187266}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DY6-4 {ECO:0000313|EMBL:APX90337.1,
RC ECO:0000313|Proteomes:UP000187266};
RA Wang X.;
RT "Genomic analysis of Xuhuaishuia manganoxidans DY6-4.";
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:PJJ80790.1, ECO:0000313|Proteomes:UP000229573}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 27767 {ECO:0000313|EMBL:PJJ80790.1,
RC ECO:0000313|Proteomes:UP000229573};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): From Individual Species to Whole Genera.";
RL Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP019124; APX90337.1; -; Genomic_DNA.
DR EMBL; PGFI01000014; PJJ80790.1; -; Genomic_DNA.
DR RefSeq; WP_076980355.1; NZ_PGFI01000014.1.
DR AlphaFoldDB; A0A1U7DJZ9; -.
DR STRING; 1267768.BV394_11860; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000187266; Chromosome.
DR Proteomes; UP000229573; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000187266};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 468 AA; 53673 MW; AABAC25C8F050BF0 CRC64;
MPKTLIGPRM RQLRREHNQT QAEMAQALGV SPSYINLLEN NQRSLSVPML MALSDIYDLD
WRELTTDEAS KSIADLRHAM QDPIFGDTKP DLHEIRAAID HAPRLVEGFL QLYRGHRTTL
EKIMRSGIEK MPEKLLETSP ETVIHDFFRD HSNHFPQLEE AAERLRGERA VAQEDLYVHL
KDRLRDKHAI QVQTRPLEEM DQTLRFYDEA AGTVFLSQAL DHNNRVFQLA HVLGLIELPD
LLDRLIENSG IKSDQGLARC RVELANYFAG AYVMPYIPLL RTAERVQYDI DRVAAAFAVS
FEQVCHRLTT LQREGARGVP FFFLRIDKAG NVSKRFNSTS FNLAEYGGAC PVWNIHAAFS
NPGVIMPQFV ELPDGERYFT ISRTVHRPVF SQETQDRRLT LALGCELQHA HRIGYAATYN
RDDERLFGQI GLNCHLCPRQ ACSQRAHQPL FVELPIDTNR RGNTRYES
//
