ID A0A1U7XWM5_NICSY Unreviewed; 865 AA.
AC A0A1U7XWM5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Uncharacterized protein LOC104238274 isoform X1 {ECO:0000313|RefSeq:XP_009790895.1};
GN Name=LOC104238274 {ECO:0000313|RefSeq:XP_009790895.1};
OS Nicotiana sylvestris (Wood tobacco) (South American tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4096 {ECO:0000313|Proteomes:UP000189701, ECO:0000313|RefSeq:XP_009790895.1};
RN [1] {ECO:0000313|Proteomes:UP000189701}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23773524; DOI=10.1186/gb-2013-14-6-r60;
RA Sierro N., Battey J.N., Ouadi S., Bovet L., Goepfert S., Bakaher N.,
RA Peitsch M.C., Ivanov N.V.;
RT "Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana
RT tomentosiformis.";
RL Genome Biol. 14:R60.1-R60.17(2013).
RN [2] {ECO:0000313|RefSeq:XP_009790895.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_009790895.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_009790895.1; XM_009792593.1.
DR AlphaFoldDB; A0A1U7XWM5; -.
DR SMR; A0A1U7XWM5; -.
DR STRING; 4096.A0A1U7XWM5; -.
DR GeneID; 104238274; -.
DR KEGG; nsy:104238274; -.
DR eggNOG; KOG2068; Eukaryota.
DR OrthoDB; 1748at2759; -.
DR Proteomes; UP000189701; Unplaced.
DR GO; GO:0030014; C:CCR4-NOT complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR CDD; cd16618; mRING-HC-C4C4_CNOT4; 1.
DR CDD; cd12438; RRM_CNOT4; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR034261; CNOT4_RRM.
DR InterPro; IPR039780; Mot2.
DR InterPro; IPR039515; NOT4_mRING-HC-C4C4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12603; CCR4-NOT TRANSCRIPTION COMPLEX RELATED; 1.
DR PANTHER; PTHR12603:SF9; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF14570; zf-RING_4; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00361; RRM_1; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000189701};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 12..60
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 112..198
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 77..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 253..287
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 301..320
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 372..406
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..99
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 263..287
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 385..403
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 865 AA; 95901 MW; B862FBD95A1A61CC CRC64;
MTMMSNEEEK RCPLCAEEMD WTDQQFKPCK CGYQVCVWCW HHIMDIAEKE ASEGRCPACR
TKYEKDKVVA MQANFERAEN NNSNRKSKPP KAKPKANEVR KDLTNVRVIQ RKMAYVTGLP
LSLADEDLLQ RKEYFGQYGK ISKISLSRTA GGSIQLLTND TCSVYITYSK EEDAIQCIQF
VHGFVLEGRY LRASFGTAKY CHAWLRNMPC SNPSCLYLHS LGADEDSFGK DEVAAIHTRS
RVQQIVGATS SAMKRSGNVL PPPIDELSNT SFTSTENSTI RSAGVTNDTV DHRSYMARVV
PSSDKDGGAG EPNGMTSFVD VGLSNSSRAE KDGNSSEDSR ILDLCSNLSS IPINKDNHAQ
ETYSDRVLFE VPSPNQPVNH LRDQNTTEIS DEPFREDSTS FDGQRSKDLN SICQEPFLMS
SRSAKCTEDY GGNSLLHRAC SSSINGMEHR SLHNQAEETL PPLSCVNSTL NDGLHDLKFQ
SSVKSDTIYR GSNSFSNEEI VEHLRRTENG SLNNFDESSA FNPVKNSIIS NILAMDFGSC
ENSLTSRHSL TGLCNEPNGQ RGSWNSLHSG QGFSFMKQDG FSSQRADLDS SSNISLMSNQ
SSILHDFRER KEQHMHESQY QTVSRPKGLA PPGFSIPSRD LPPGFPLSDE IGGFPHTLSV
TSIYAGSQLV NSSSNLIHPP STRSTRTAGE ADFVDPAILS CGKGKPTNGL SISGLEVGSQ
RRALEDEARL WLLMQQNYAD QEGKFSRVLA SQTPSAHLEQ RFHGADEYAG LNDLRGFSSR
MVDQRQNLDQ SLYAHLSQQK LANGHSSNGY HHNVLDEFQC RNEVGRMAEL QRNDRLGLNG
YYAGNGNLTF QGSRSGDVFA RVFGM
//
