ID A0A1U7YJV3_NICSY Unreviewed; 639 AA.
AC A0A1U7YJV3;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Golgin candidate 4 {ECO:0000313|RefSeq:XP_009799105.1, ECO:0000313|RefSeq:XP_009799106.1};
GN Name=LOC104245224 {ECO:0000313|RefSeq:XP_009799105.1,
GN ECO:0000313|RefSeq:XP_009799106.1};
OS Nicotiana sylvestris (Wood tobacco) (South American tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4096 {ECO:0000313|Proteomes:UP000189701, ECO:0000313|RefSeq:XP_009799105.1};
RN [1] {ECO:0000313|Proteomes:UP000189701}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23773524; DOI=10.1186/gb-2013-14-6-r60;
RA Sierro N., Battey J.N., Ouadi S., Bovet L., Goepfert S., Bakaher N.,
RA Peitsch M.C., Ivanov N.V.;
RT "Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana
RT tomentosiformis.";
RL Genome Biol. 14:R60.1-R60.17(2013).
RN [2] {ECO:0000313|RefSeq:XP_009799105.1, ECO:0000313|RefSeq:XP_009799106.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_009799105.1,
RC ECO:0000313|RefSeq:XP_009799106.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_009799105.1; XM_009800803.1.
DR RefSeq; XP_009799106.1; XM_009800804.1.
DR STRING; 4096.A0A1U7YJV3; -.
DR GeneID; 104245224; -.
DR KEGG; nsy:104245224; -.
DR eggNOG; ENOG502QRE8; Eukaryota.
DR OrthoDB; 1112799at2759; -.
DR Proteomes; UP000189701; Unplaced.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd12266; RRM_like_XS; 1.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005379; FDM1-5/IDN2_XH.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR21596:SF65; PROTEIN INVOLVED IN DE NOVO 2-RELATED; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03469; XH; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000189701};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT DOMAIN 43..86
FT /note="Zinc finger-XS"
FT /evidence="ECO:0000259|Pfam:PF03470"
FT DOMAIN 123..233
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT DOMAIN 511..638
FT /note="Factor of DNA methylation 1-5/IDN2"
FT /evidence="ECO:0000259|Pfam:PF03469"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 96..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 348..369
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..119
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 639 AA; 73868 MW; E05FB26429BE27F1 CRC64;
MDHSSGEDTD ISESEIEEYE EKSYEDLKRG NHSLKISDVA YTCPYCPKKR KRDFGYKELV
QHASGVGSGN SNKRTARDKA NHLALAKYLE NDVVVAGDSS NDSSKPDAKP DPQADPLADH
DRDEMFVWPW IGIVVNILTE YKDGRYVGES GSKLRDQLAR RGFNPTRVRP LWNYQGHSGT
ALVEFNKDWS GFGNAMSFEK AYEADHHGKR EWKANIGKKS DLYAWIARAD DYKALNIVGE
NLRKVGDLRT ISDIMEEEAR KTNKLVSNLT NVIEVKKLHL KEMENKFKET AQSLQQLVEE
KDKLHQAYNE EIRKIQSSAR DHFQKIFNDH EKLKLQLESQ KKELELRGRE LEQREAKNES
DRKKLSEELE QNAVLNTSLS AAAEEQRKVD EKVLKLAEEQ KRQKEDLHKR IIHLEKQLDA
KQAVELEIEQ LRGSLKVMKH IEDEGDQEVL KKVDTLLKSL REKEEEYEGL EALNQTLIVK
ERNSNDELQD ARKELVNGLK ELPRVGPIGV KRMGELDNRP FHEAMKRKYN ESEADERATE
LCSLWEEYLR DPGWHPIKVV TVNGKLENVI DDEDEKLKDL KRNYGEDVYK AVTAALIEIN
DYNPSGRYII SELWNYAVNQ KATLEEGVTV LLNLWKKKR
//
