ID A0A1U7ZMJ4_NELNU Unreviewed; 520 AA.
AC A0A1U7ZMJ4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like {ECO:0000313|RefSeq:XP_010249203.1};
GN Name=LOC104591839 {ECO:0000313|RefSeq:XP_010249203.1};
GN ORFNames=HUJ06_006584 {ECO:0000313|EMBL:DAD35944.1};
OS Nelumbo nucifera (Sacred lotus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo.
OX NCBI_TaxID=4432 {ECO:0000313|Proteomes:UP000189703, ECO:0000313|RefSeq:XP_010249203.1};
RN [1] {ECO:0000313|EMBL:DAD35944.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:DAD35944.1};
RX PubMed=32343808;
RA Shi T., Rahmani R.S., Gugger P.F., Wang M., Li H., Zhang Y., Li Z.,
RA Wang Q., Van de Peer Y., Marchal K., Chen J.;
RT "Distinct Expression and Methylation Patterns for Genes with Different
RT Fates following a Single Whole-Genome Duplication in Flowering Plants.";
RL Mol. Biol. Evol. 37:2394-2413(2020).
RN [2] {ECO:0000313|RefSeq:XP_010249203.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; DUZY01000004; DAD35944.1; -; Genomic_DNA.
DR RefSeq; XP_010249203.1; XM_010250901.2.
DR GeneID; 104591839; -.
DR KEGG; nnu:104591839; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 368683at2759; -.
DR Proteomes; UP000189703; Unplaced.
DR Proteomes; UP000607653; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189703};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 169..199
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 200..234
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 272..302
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 303..337
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 520 AA; 58711 MW; 7281DFBC423E1C0A CRC64;
MNQVNRVNCH YLLNRCGNLK QLKQVHAQSI IQGLYRLQYL ACKILNKYAS FNEALDSLKV
FNQIQNPDVI SWTSLINLNL TIDQPHEALS AFSDLVISGL RPDNFSIVGA LSACGRIGDL
SHGKMVHGMI YRHELSFEPI VGNALIDMYS RNGEIKVAEL IFKEMEVKDI ASWTSLLHGF
VKCNDLESAR WVFDRMPQRN SISWTAMITG YIRGRSPIQA LELFQKMKLE GNSPPTLITI
VAVLSGCADI GALDLGQSIH AYINKTGLDS NSITLHNALM DMYSKSGRLD GAEEIFREMP
GKDIFSWTTM ISGLACHGNS VRAIEVFEEM LRSAVSPNEV TFVAILTACS HAGMVTEGRR
WFDKMSQVYG FEPRIEHYGC MVDLYGRAGL VEEAKKFIEQ MSIEADAVIW RSLLSACLVQ
GNLRLAEMAG KKVIELEPDD DGVYLLLWNI YCSVKRWDEA VKIRKMMKDL QVKKRPGCSW
IEVNGVVHEF IAEDRIHSLH SEIYIVLEVI TEQLKMDLYQ
//
