ID A0A1U8DYF5_CAPAN Unreviewed; 562 AA.
AC A0A1U8DYF5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=AT-rich interactive domain-containing protein 5 {ECO:0000313|EMBL:PHT61737.1};
GN ORFNames=T459_34420 {ECO:0000313|EMBL:PHT61737.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT61737.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT61737.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000256|PROSITE-ProRule:PRU00285, ECO:0000256|RuleBase:RU003616}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT61737.1}.
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DR EMBL; AYRZ02000122; PHT61737.1; -; Genomic_DNA.
DR RefSeq; XP_016540068.1; XM_016684582.1.
DR AlphaFoldDB; A0A1U8DYF5; -.
DR STRING; 4072.A0A1U8DYF5; -.
DR EnsemblPlants; PHT61737; PHT61737; T459_34420.
DR GeneID; 107840654; -.
DR Gramene; PHT61737; PHT61737; T459_34420.
DR OMA; PASQMEP; -.
DR OrthoDB; 654178at2759; -.
DR Proteomes; UP000222542; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00298; ACD_sHsps_p23-like; 1.
DR CDD; cd16100; ARID; 1.
DR Gene3D; 2.60.40.790; -; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR045147; ARI3A/B/C.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR PANTHER; PTHR15348; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT; 1.
DR PANTHER; PTHR15348:SF0; PROTEIN DEAD RINGER; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF00011; HSP20; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF49764; HSP20-like chaperones; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 265..356
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 461..562
FT /note="SHSP"
FT /evidence="ECO:0000259|PROSITE:PS01031"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 96..143
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..124
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..143
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 562 AA; 62111 MW; B7D3E2134E23276E CRC64;
MVDCNIDDSN ETLPQMGDAI SGKDETNGTE SKKDLLAEKD NLFTAGVVNC TKSESLGSSL
LDAKSLQVQN EQDCSADEKV LSKSPTIATK TERYVNASEL QGPGGCRDST NLDSSEQMAS
RVQNESPVEV RPDDEEPKQR KDGVVIGGEL CGVHPASQME PSMVHVTGTE ELKMGVKRCA
SLLSNKEMEE NLKGGVILKQ VLMENEMKEG LDDVLKETEM LSANKTKDEL LKPELDVEHD
IDVKTPAKTF LLETNPMGED ESGTEAEQAA FMKELEAFHK ERCLEFKAPR FYGEPLNCLK
LWRAVIRLGG YEQVTSCKLW RQVGESFKPP KTCTTVSWTF RCFYEKALLE YEKHKMRSGE
LPFTDAAFAE TTSAGIQGNQ ASGSGRARRD AAARAMQGWH SQRLLGNGEV GDPIIKEKNS
VSLPKREKQL KSIGLKRKKP SAMEHAAKVT GMKVSKPHLE TMVVDIGPPA DWVKINVQKT
KDCYEVYALV PGLLREEVRV QSDPAGRLVI SGQPEQLDNP WGVGPFKKVV SLPSRIDPHQ
TSAVVTLHGQ LFVRVPFEQS NM
//
