ID A0A1U8EGJ1_CAPAN Unreviewed; 844 AA.
AC A0A1U8EGJ1; A0A2G2YQE4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:PHT71959.1};
GN ORFNames=T459_22744 {ECO:0000313|EMBL:PHT71959.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT71959.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT71959.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT71959.1}.
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DR EMBL; AYRZ02000009; PHT71959.1; -; Genomic_DNA.
DR RefSeq; XP_016542445.1; XM_016686959.1.
DR RefSeq; XP_016542446.1; XM_016686960.1.
DR AlphaFoldDB; A0A1U8EGJ1; -.
DR STRING; 4072.A0A1U8EGJ1; -.
DR EnsemblPlants; PHT71959; PHT71959; T459_22744.
DR GeneID; 107842910; -.
DR Gramene; PHT71959; PHT71959; T459_22744.
DR KEGG; cann:107842910; -.
DR OMA; YREMVNT; -.
DR OrthoDB; 541770at2759; -.
DR Proteomes; UP000222542; Chromosome 9.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 8.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 165..199
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 384..419
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 455..485
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 486..516
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 517..551
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 618..652
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 653..687
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 754..788
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 844 AA; 95151 MW; 0A6F540D6A42AFF3 CRC64;
MLNEARKSFI LFNRFNNYTT NIDYSLYGYL FQLCKQHCLI RQGKQLHARL ILCSTTPNNF
LGSKLISFYL RNKRFKEAHH VFEEIPERDL FSWNALMIGY ASENYYVETL KVFYSLLYEN
LESPHLKPDN FTVTCVLKAV YGVLGDSFLA KMMHGYVVKN GFDSDAVILN GLIDCYLKSG
DMEMAKNVFD EIPERDGISW NSIISGYSRC DYSLYGHLLQ LCKERCLIRQ GKQTHARLVL
SSTIPNNFLA SKLINFYAKN KHLKEAHHVF NEIPEKNTFS WNALMIGYSS ENYHVETLKL
FSSFLSENLE SYHVKPDNFT VTCVLKAVSG VLGDSVLAKM IHCYVVKNGF DSDLFVLNGL
ITSYSKSVDM VLAKSVFDEI PEKDVVSWNS MISGYFQCGF YEECKGLYRE MLQLEGFGPD
GVTVVSVLQA CAQSNDLILG IEIHQYVIEN GIEVDISVFN SIIALYSKCG SLDYAREIFE
EMGERDEITY GTMISGYMNY GFVDKAVNLF REMEKPCLST WNALLSGLVQ NNLYERALEL
VREMRLSGVQ PNAVTLSSIL PGISDLAFAK GGKEVHAYAI KSDCNQNIFV ATGVIDIYAK
LGFIQSARQV FDHTKDRSVI IWTAIISAYA NHGDAKAALD LLNVMLSHCI RPDSVTFTAV
LAACAHSGLI EEAWTIFELL EKYGIQPLDE HYACMVGVLS RAGKLSEAID FIRKMSIEPS
ARVWGALLNG ASVYGDVEVG RFACSHLFEM EPESTGNSTI MANLYSKAGR WEEAQELRKK
MKRLGLKKII GSSWMETCQG VKSFVATDES NEKTGEVYGV LESLLGSMRD DGYVMMDEFK
EETM
//
