ID A0A1U8FWU7_CAPAN Unreviewed; 464 AA.
AC A0A1U8FWU7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=JmjC domain-containing protein {ECO:0000259|PROSITE:PS51184};
GN ORFNames=T459_33420 {ECO:0000313|EMBL:PHT62757.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT62757.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT62757.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000256|ARBA:ARBA00001954};
CC -!- SIMILARITY: Belongs to the JARID1 histone demethylase family.
CC {ECO:0000256|ARBA:ARBA00006801}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT62757.1}.
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DR EMBL; AYRZ02000062; PHT62757.1; -; Genomic_DNA.
DR RefSeq; XP_016563657.1; XM_016708171.1.
DR AlphaFoldDB; A0A1U8FWU7; -.
DR STRING; 4072.A0A1U8FWU7; -.
DR EnsemblPlants; PHT62757; PHT62757; T459_33420.
DR GeneID; 107862557; -.
DR Gramene; PHT62757; PHT62757; T459_33420.
DR KEGG; cann:107862557; -.
DR OMA; MFSRRFT; -.
DR OrthoDB; 120564at2759; -.
DR Proteomes; UP000222542; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016706; F:2-oxoglutarate-dependent dioxygenase activity; IBA:GO_Central.
DR GO; GO:0000987; F:cis-regulatory region sequence-specific DNA binding; IEA:EnsemblPlants.
DR GO; GO:0033746; F:histone H3R2 demethylase activity; IEA:EnsemblPlants.
DR GO; GO:0033749; F:histone H4R3 demethylase activity; IEA:EnsemblPlants.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0040029; P:epigenetic regulation of gene expression; IEA:EnsemblPlants.
DR GO; GO:0010476; P:gibberellin mediated signaling pathway; IEA:EnsemblPlants.
DR GO; GO:0010030; P:positive regulation of seed germination; IEA:EnsemblPlants.
DR GO; GO:0045905; P:positive regulation of translational termination; IBA:GO_Central.
DR GO; GO:0010099; P:regulation of photomorphogenesis; IEA:EnsemblPlants.
DR GO; GO:0010114; P:response to red light; IEA:EnsemblPlants.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR041667; Cupin_8.
DR InterPro; IPR003347; JmjC_dom.
DR PANTHER; PTHR12480:SF6; 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4; 1.
DR PANTHER; PTHR12480; ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD; 1.
DR Pfam; PF13621; Cupin_8; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 126..298
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
SQ SEQUENCE 464 AA; 54022 MW; 0BCAA59EF946FC80 CRC64;
MGLKIGGRIE KVNGRQLTYN DFAEKYMAQN QPVVLKGLMD DWRACKDWVS PTGKPNLHFF
STHFGKSKVQ VADCGTREFT DQKRIEMTVA EFVDHWLRVS AADKGNDSNG GAAVGCLLYL
KDWHFVKEYP EYNAYRTPMD FSDDWLNFYL DKFRMHNDPD TYSERNEISC SDYRFVYMGS
KGTWTPLHAD VFRSYSWSAN VCGKKQWYFL SPSQHRLVFD RNMKSSVYNI FADVSQSKFP
EFEKSIWWEC TQEENEVIFV PSGWYHQVHN LEDTISINHN WFNGYNLSWV WDLLLKDYNE
ASEYIEDLQG CEDFEELCQR NLAANTGMNF YDFFIFIVRF TFANVVLLHT LSHGKKETSQ
EPSESMQHIH FNLEAIRSIA VKMKPINAGD RRGVLHDLRK NLEDHSFIEL CAAVGKTYAL
MHDQDEMTPA LLQCTDSLFT SLVRSQVQSS EDLVAFIDDA LTIY
//
