ID A0A1U8GD98_CAPAN Unreviewed; 794 AA.
AC A0A1U8GD98;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Putative beta-D-xylosidase 6 {ECO:0000313|EMBL:PHT84183.1};
GN ORFNames=T459_12626 {ECO:0000313|EMBL:PHT84183.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT84183.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT84183.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT84183.1}.
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DR EMBL; AYRZ02000004; PHT84183.1; -; Genomic_DNA.
DR RefSeq; XP_016569321.1; XM_016713835.1.
DR AlphaFoldDB; A0A1U8GD98; -.
DR EnsemblPlants; PHT84183; PHT84183; T459_12626.
DR GeneID; 107867546; -.
DR Gramene; PHT84183; PHT84183; T459_12626.
DR KEGG; cann:107867546; -.
DR OMA; IGFWAND; -.
DR OrthoDB; 2963694at2759; -.
DR Proteomes; UP000222542; Chromosome 4.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046556; F:alpha-L-arabinofuranosidase activity; IBA:GO_Central.
DR GO; GO:0009044; F:xylan 1,4-beta-xylosidase activity; IBA:GO_Central.
DR GO; GO:0031222; P:arabinan catabolic process; IBA:GO_Central.
DR GO; GO:0045493; P:xylan catabolic process; IBA:GO_Central.
DR Gene3D; 3.40.50.1700; Glycoside hydrolase family 3 C-terminal domain; 1.
DR Gene3D; 3.20.20.300; Glycoside hydrolase, family 3, N-terminal domain; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044993; BXL.
DR InterPro; IPR026891; Fn3-like.
DR InterPro; IPR002772; Glyco_hydro_3_C.
DR InterPro; IPR036881; Glyco_hydro_3_C_sf.
DR InterPro; IPR001764; Glyco_hydro_3_N.
DR InterPro; IPR036962; Glyco_hydro_3_N_sf.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR PANTHER; PTHR42721:SF3; BETA-D-XYLOSIDASE 5-RELATED; 1.
DR PANTHER; PTHR42721; SUGAR HYDROLASE-RELATED; 1.
DR Pfam; PF14310; Fn3-like; 1.
DR Pfam; PF00933; Glyco_hydro_3; 1.
DR Pfam; PF01915; Glyco_hydro_3_C; 1.
DR PRINTS; PR00133; GLHYDRLASE3.
DR SMART; SM01217; Fn3_like; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF52279; Beta-D-glucan exohydrolase, C-terminal domain; 1.
PE 4: Predicted;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW Secreted {ECO:0000256|ARBA:ARBA00022525};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..43
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 717..787
FT /note="Fibronectin type III-like"
FT /evidence="ECO:0000259|SMART:SM01217"
SQ SEQUENCE 794 AA; 87566 MW; D5749D4B0BDA4533 CRC64;
MYHNNSNFFF LPNFHHFTMK LYIVSLISTT TLLWLTTLVS NVASTQPPFS CDSTNPQTKS
LKFCQTQLPI SVRAQDVVSR LTLDEKIAQL VNSAPAVPRL GIPAYEWWSE SLHGVGSAGK
GIFFNGSIIG ATSFPQVILT AATFDENLWY RIGQVIGMEA RAVYNAGQAV GMTFWAPNIN
IFRDPRWGRG QETPGEDPIM TGKYAIRYVR GVQGDSFNGG QLKKGALQAS ACCKHFTAYD
LDQWKNLDRF SFNAIVTPQD LVDTFQPPFQ DCIQKAQASG IMCSYNSVNG IPSCANYNLL
TKTARQQWGF HGYITSDCDA VQVMHDNHKY GKTPEDSVAF ALKSGMDVDC GDYLKKYTKS
AITQKKISEV HIDRALHNLF AIRMRLGLFN GNPQKQIFGN ISPSVVCAPQ HQELALEAAR
NGIVLLKNSG KLLPLSKAKT NSLAVIGPNA DNAYVLRGNY DGPPCIYVEI LKALEGYVKV
QYHQGCNAVN CTSAYIDQAV NIARNADYVV LVMGLDQGQE REQFDRDDLV LPGQQENLIN
SVAKTAKKPV ILVLLSGGPV DVNFAKNNPK IGSILWAGYP GEAGGIALAQ IIFGEHNPGG
KLPVTWYPQS FVKIPMTDMR MRPDPKTGYP GRTYRFYKGP KVYEFGYGLS YTTYSYEFNS
ATPNTIQLNQ LSTSKIVEGS GSIRYTSVDE IGSDNCEKAK FSAHVSVRNS GEMDGKHPVL
LFVKNDKAQY GSPIKQLVGF QSVRLKAGEN SQLVFEISPC EHLSSANEDG LRMIEEGSRY
LVVGDAEHPI NIVI
//
