ID A0A1U8GDQ7_CAPAN Unreviewed; 269 AA.
AC A0A1U8GDQ7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 03-MAY-2023, entry version 22.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN ORFNames=T459_32566 {ECO:0000313|EMBL:PHT63557.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT63557.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT63557.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT63557.1}.
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DR EMBL; AYRZ02000028; PHT63557.1; -; Genomic_DNA.
DR RefSeq; XP_016569476.1; XM_016713990.1.
DR AlphaFoldDB; A0A1U8GDQ7; -.
DR STRING; 4072.A0A1U8GDQ7; -.
DR EnsemblPlants; PHT63557; PHT63557; T459_32566.
DR Gramene; PHT63557; PHT63557; T459_32566.
DR OMA; RIKNHFE; -.
DR OrthoDB; 4793at2759; -.
DR Proteomes; UP000222542; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044790; MD26C-like.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR47210:SF3; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C ISOFORM X1-RELATED; 1.
DR PANTHER; PTHR47210; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 98..172
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
SQ SEQUENCE 269 AA; 31433 MW; 4ADA3BCFB5602AB3 CRC64;
MELDELRSML KNSSVDLWGL IDTAISVAIL DHGNELRSRR DAIVEKLYTP VLCNSCYSDG
NYESLICNRS IDTNVDDDHH HKLKIEEKST EYEEDLENKI LRIKNHIEIP NQSENCLVDL
LQYLAEMDIS FKVLEKTDIG RHVNRLRKHS SNEVRRLVKL LIRRWKDIVD EWVRLNTLVE
ETGDANSPFQ PYLNNFQDIS NASSSYCGHK NLENNKISPS SKRLREDYLE EHHAKIQRTR
EVDLHQELGR PKNSVVANGF QAKYRYLDN
//
