ID A0A1U8GT14_CAPAN Unreviewed; 495 AA.
AC A0A1U8GT14;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Zinc finger CCCH domain-containing protein 22 {ECO:0000313|EMBL:PHT93365.1};
GN ORFNames=T459_01247 {ECO:0000313|EMBL:PHT93365.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT93365.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT93365.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT93365.1}.
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DR EMBL; AYRZ02000001; PHT93365.1; -; Genomic_DNA.
DR RefSeq; XP_016574406.1; XM_016718920.1.
DR AlphaFoldDB; A0A1U8GT14; -.
DR STRING; 4072.A0A1U8GT14; -.
DR EnsemblPlants; PHT93365; PHT93365; T459_01247.
DR GeneID; 107872130; -.
DR Gramene; PHT93365; PHT93365; T459_01247.
DR KEGG; cann:107872130; -.
DR OMA; QYTRGIG; -.
DR OrthoDB; 3060898at2759; -.
DR Proteomes; UP000222542; Chromosome 1.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 2.30.30.1190; -; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR47650; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR PANTHER; PTHR47650:SF2; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT DOMAIN 142..169
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 296..342
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT ZN_FING 142..169
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 239..268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 341..381
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 396..421
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 473..495
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..263
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 355..369
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 495 AA; 55738 MW; 9A58ADEC8C8EB39B CRC64;
MGDSEERLLE EQLENQLKEQ KDALHSLNEA LSTDPSDPEI LLVHEELVQS IKDAEEGLLH
LKRARLLLEV DASLRGSKEQ LADAEVEPLD LTEIEAESLV DEEYTVGSKC RFRNNDGRWY
NGLIVGLEGS EFAKICFRAP TSENMLMCKF FLQQRCRFGS SCRLSHGIDI PVSSLKKYIP
MKWDSSLAGS SIWARSDGRA GLWKKAELES WDEKLNMGRV VFRDDGSSAM LGAENIELSE
HAEASDEEES YSGSEEFDSS AYEDDSPEGL GFVESTALQC GVQTETTLFA KWENHTRGIA
SKMMANMGYR EGMGLGASGQ GMVNPVPVKV LPPKQSLDYA VKNQTAENED NKRKKRSRGG
KRKREKKFAA AARAAKEEEE SRADVFSLIN TQLAVHEETM NNSAGNRQRS KTKREEKKED
RRSLVAYDDE IKELRIQAQK LEEMAQRNRN EKPVYEAAMR KLNETRKAIA TAEAAHASAS
NAVHSKEKEK RWLKF
//
