ID A0A1U8GWJ7_CAPAN Unreviewed; 645 AA.
AC A0A1U8GWJ7; A0A2G2Z8F4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Protein INVOLVED IN DE NOVO 2 {ECO:0000313|EMBL:PHT78249.1};
GN ORFNames=T459_16301 {ECO:0000313|EMBL:PHT78249.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT78249.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT78249.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT78249.1}.
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DR EMBL; AYRZ02000006; PHT78249.1; -; Genomic_DNA.
DR RefSeq; XP_016575480.1; XM_016719994.1.
DR RefSeq; XP_016575481.1; XM_016719995.1.
DR AlphaFoldDB; A0A1U8GWJ7; -.
DR STRING; 4072.A0A1U8GWJ7; -.
DR EnsemblPlants; PHT78249; PHT78249; T459_16301.
DR GeneID; 107873237; -.
DR Gramene; PHT78249; PHT78249; T459_16301.
DR KEGG; cann:107873237; -.
DR OMA; ARVWAST; -.
DR OrthoDB; 1112799at2759; -.
DR Proteomes; UP000222542; Chromosome 6.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd12266; RRM_like_XS; 1.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005379; FDM1-5/IDN2_XH.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR21596:SF65; PROTEIN INVOLVED IN DE NOVO 2-RELATED; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03469; XH; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT DOMAIN 43..86
FT /note="Zinc finger-XS"
FT /evidence="ECO:0000259|Pfam:PF03470"
FT DOMAIN 119..229
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT DOMAIN 507..635
FT /note="Factor of DNA methylation 1-5/IDN2"
FT /evidence="ECO:0000259|Pfam:PF03469"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 345..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 345..365
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 645 AA; 74300 MW; E98106FAF6C9D6BF CRC64;
MDHSSGEDTE ISESEIEEYE EKSYEDLKSG NHSLKISDVA YTCPYCPKKR KRDFLYKELV
QHASGVGSCS SNKRTARDKA NHLALAKYLE TDVAFADDSS KPDAEPDPQA DPLADHDRDE
MFVWPWIGVV VNIPTEFKDG RYVGESGSKL RDQLTKRGFN PTRVRPLWNY QGHSGTALVE
FNKDWSGFGN AMSYEKAYEA DHHGKKDWKA NLGKNSDLYA WIARADDYKA INIVGENLRK
VGDLRTISDI MEEEARKTNK LVSNLTNVIE VKKLHLKEMA DKFKETAQSL KQLVEEKDKL
HQAYNEEIRK IQSSARDHFQ KIFNDHEKLK LQLESQKKEL ELRGRELEKR EAKNESDRKK
LSEELEQNAT LNTSLSAAAE EQRKVDEKVL KLAEEQKRQK EDLHKRIIQL EKQLDAKQAV
ELEIEQLRGS LNVMKHIEDE GDQEVLKKVD TLLKSLREKE EEYDGLEALN QTLIVKERNS
NDELQEARKE LVNGLKELPR VGPIGVKRMG ELDNRPFHEA MKRNYNESEA DERATELCSL
WEEYLRDPGW HPIKVIIVNG KPENVIDVED EKLKDLKKNY GEEVYKAVTA ALTEINDHNP
SGRYIISELW NYAVNKKATL EEGVTVLLNL WKKKRSGLML PCALP
//
