ID   A0A1U8HZL3_GOSHI        Unreviewed;      1387 AA.
AC   A0A1U8HZL3;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   27-MAR-2024, entry version 27.
DE   SubName: Full=Splicing factor 3B subunit 3-like {ECO:0000313|RefSeq:XP_016671445.1};
GN   Name=LOC107891227 {ECO:0000313|RefSeq:XP_016671445.1};
OS   Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016671445.1};
RN   [1] {ECO:0000313|Proteomes:UP000189702}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX   PubMed=25893780; DOI=10.1038/nbt.3208;
RA   Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA   Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA   Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA   Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA   Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT   "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT   provides insights into genome evolution.";
RL   Nat. Biotechnol. 33:524-530(2015).
RN   [2] {ECO:0000313|RefSeq:XP_016671445.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_016671445.1};
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
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DR   RefSeq; XP_016671445.1; XM_016815956.1.
DR   STRING; 3635.A0A1U8HZL3; -.
DR   PaxDb; 3635-A0A1U8HZL3; -.
DR   GeneID; 107891227; -.
DR   KEGG; ghi:107891227; -.
DR   OMA; QICAYYM; -.
DR   OrthoDB; 455456at2759; -.
DR   Proteomes; UP000189702; Chromosome 14.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0005686; C:U2 snRNP; IBA:GO_Central.
DR   GO; GO:0030620; F:U2 snRNA binding; IBA:GO_Central.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR10644:SF6; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN; 1.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT   DOMAIN          113..672
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          1088..1339
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        8..24
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1387 AA;  151550 MW;  25CEAE3F6F00A81C CRC64;
     MALSEEECST AKASSSSPAS SSATVSSQGV NYLAKCVLRG SAILQVAYGH LRSPSSLDVV
     FGKETSIELV IIGEDGIVTS VCEQTVFGTI KDLAILPWNE KVYGQNTQMP GKDLLVVISD
     SGKLSFLSFC NEMHRFFPVD HIQLSDPGNA RDQIGRMLAV DSTGRFIATS AYEDRLAFFS
     LSMSGDDIID KKIFYPPENE GSGSSTRNAQ RISVRGTIWS MCFVSKDPIQ TNKEHNPVLA
     IVLNRKGNTL NELVLLGWNL SEHAVFILSQ YLEAGPLAHS IVEVPHSCGY ALLFRVGDAL
     LMDLRDARNP HCVYRTTLDF SVHTPEEHIC VEELCTAHEF DDDGLFNVAA CALLQLSDYD
     PMCIDGESGS GKTTCKHVCS FSWEPKSNRS PRIIFCLDTG EFYMIDVSFD SDGPKVNISD
     CLYRSQPCKS LLWVDGGFLV AIVEMGDGLV LKVENEKLIY KSPVQNIAPI LDMSIVNYHG
     EKHDKMFACC GVAPEGSLRI IRSGISVEKL LRTAPIYQGI SGTWTVQMKF TNSYHSFLVL
     SFVEETRVLS VGLSFTDVTD SVGFQPDVCT LACGLVADGQ LIQIHQNAVR LCLPTKAAHS
     EGIIMSSPVC ITWSPDNMSI SLGAVGQSLI VVSTSNPYFL FILGVRSLSA YNYEIYELQH
     VGLQYELSCI SIPQKHLEMR HLSSNVNLVD VGGAVPPVGV GMGITFVIGT HKPSVEILSF
     APEGLRVLGA GTISLTTIME TAISGCIPQD VRLVLVDQFY VLAGLRNGML LRFEWPSAFT
     PSSELCLRSS IPFPEKVENF LLNTKLNSFG SETCSVNMGE KDGLPVTLQL IATRRIGITP
     VFLVPLSDSL DADIIALSDR PWLLHTARHS LSYTSISFQP STHATPVCSV ECPKGILFVA
     ENSLHLVEMV HSKRLNVQKF HLEGTPRKVL YHSESKLLIV MRTEPNSDTC SEICGVDPLS
     GSVMASFKLG PGETGKCMEL VRAGNEQVLV VGTSLSSGPA IMPSGEAEST KGRLIVLCIE
     HVQHSDSGSM TFSSMAGSSS QRNSPFREIV GHATEQLSSS SICSSPDDTS CDGVKLEETE
     AWQFRPAYTT TWPGMVLAIC PYLGRYFLAS AGNAFYVCAF PNDNPQRVRR FAIARTRFMI
     TSLTAYFTRI AVGDCRDGIL FYSYNEDTKK LDQTYCDPSQ RLVADCVLTD ADTAIVSDRK
     GSIAVLSCSD RLEDNASAER NLTQICAYYM GEIAMSIKKG SFIYKLPADD MLNSCEALNA
     SLDPSHSAIM ASTLLGSIMI FIPISREEHE LLEAVQARLI LHPLTAPVLG NDHNEYRSRE
     NPAGVPKVLD GDMLSQFLEL TSMQQEAVLS FPIISPVAQK LSPKPPPSPI PVSKVVQLLE
     RVHYALN
//