ID A0A1U8I0F9_GOSHI Unreviewed; 795 AA.
AC A0A1U8I0F9;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Ribonuclease II, chloroplastic/mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_016669693.1};
GN Name=LOC107889683 {ECO:0000313|RefSeq:XP_016669693.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016669693.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016669693.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016669693.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016669693.1; XM_016814204.1.
DR AlphaFoldDB; A0A1U8I0F9; -.
DR STRING; 3635.A0A1U8I0F9; -.
DR PaxDb; 3635-A0A1U8I0F9; -.
DR GeneID; 107889683; -.
DR KEGG; ghi:107889683; -.
DR OrthoDB; 12396at2759; -.
DR Proteomes; UP000189702; Chromosome 13.
DR GO; GO:0000932; C:P-body; IBA:GO_Central.
DR GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006402; P:mRNA catabolic process; IBA:GO_Central.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR001900; RNase_II/R.
DR PANTHER; PTHR23355:SF42; EXORIBONUCLEASE II, MITOCHONDRIAL; 1.
DR PANTHER; PTHR23355; RIBONUCLEASE; 1.
DR Pfam; PF00773; RNB; 1.
DR SMART; SM00955; RNB; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 390..686
FT /note="Ribonuclease II/R"
FT /evidence="ECO:0000259|SMART:SM00955"
SQ SEQUENCE 795 AA; 88911 MW; ECE2C4A18C325D71 CRC64;
MMAVRAVNGG SLFRTAASPP LLTFGCRFRQ FSSLPFRRNT ELGLRFPFFC CGNQFLGYGG
GLSRSVHSLV DCVMEELTAW RSRRRIRATV KLTTSGELLE DKLVNQEIEK GLLLEFKKDS
DRVLLGVAQR PDGKKNWMVY DQNGVTSSIR PQQITYIVPG VENFDHAEIS KFLQKAQENL
DPTLLEIAWV ELLEKNASVT AEELAEMIFG SSEPLASYCA HLLLSKDEVY FTVLATKGSR
AIYGPRPTGQ VHVEELLHKK LAKDAAEKEL QDFVQLIVSA KAKPALAKPP KSSWMVDEKI
QYKIESLEAY AIDACKSDEQ RKTAGMILKA MGLTKTASSA LNLLINIGYF PVHVNLDLLK
LNILTDHSDE IIAAAESLLS DSSDSDEMNR EDLTHLKVYA IDVDEADELD DALSATKLQD
GRMKIWIHVA DPARYVEPGS MVDREALRRG TSVFLPTGTY PMFPEKLAME GMSLKQGELC
NAVSVSVILH SDGSIAEYSV QNSIIKPTYM LTYESATELL HLNLEEEAEL KILSEAAALR
LKWRRQQGAI DTSTLEACIK VVNPEDLEPS INLYVENQAD PAMRLVSEMM ILCGEVVATF
GSRNNIPLPY RGQPQSNIDV SAYSHLPEGP VRSSAIVRIM RAAEIDFRKP IRHGVLGLPG
YVQFTSPIRR YLDLLAHYQV KAFLKGETPP FSAGQLEGMA SIVNMQVRVV RKLSASSLRY
WIIEFLRRQP REKKYRALIL RFIKDRIAAL FVVEVGLQAS AWVSIGSQVG DEVEVQVEEA
HPRDDVLYLK EVLRN
//
