ID A0A1U8I227_GOSHI Unreviewed; 629 AA.
AC A0A1U8I227;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Pentatricopeptide repeat-containing protein At2g36980, mitochondrial-like {ECO:0000313|RefSeq:XP_016672292.1};
GN Name=LOC107891875 {ECO:0000313|RefSeq:XP_016672292.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016672292.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016672292.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016672292.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016672292.1; XM_016816803.1.
DR AlphaFoldDB; A0A1U8I227; -.
DR PaxDb; 3635-A0A1U8I227; -.
DR GeneID; 107891875; -.
DR KEGG; ghi:107891875; -.
DR OMA; HMELAHE; -.
DR OrthoDB; 444497at2759; -.
DR Proteomes; UP000189702; Chromosome 14.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47924:SF323; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 35..69
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 138..172
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 302..336
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 403..437
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 629 AA; 70183 MW; 5D6A9466D8F083DB CRC64;
MPSNLHQLTS KIVSLSKSGF ITTARKLFDE MPHKDSITWN AMLSSYSQLG LHTDALSLFH
LMRYTNTKPD HFTFTSTLNA CSGLGSFRNG TKVHALIIAF GYQCYLPVNN SVIDMYGKCL
DPCSARKAFE EMGGSIRNEV TWCSLLFAYA NSGQFSVAFE TFYEMPKRVL VAWNIMITGF
ARYGEVEMCI QLLKEMRESL CCFPDEWTFS SLMNACTESS DYAYGCTAHG FIIKIGWSSA
MEVKNSILSF YAKLGCMDVA IKEFESVGLL SQVSWNAMID GYIKMGNTID AFHVFQRAPM
KNVISWTSMI AGYARNGEGE QALNLFVQMV RSCICLDEFT FGAILHACSS LAVLGFGKMV
HGCVIRYGFQ AYVYVGNGLV NMYAKCGDIK GSSYAFNEIL EKDLVSWNAM LFGFGMHGLS
TQALQIYDEM VAHGMKPDKV SFIGLLMTCS HAGLINKGRL FFDIMSSLYG LTYEIDHVAC
MVDMLGRGGY LVEAKELSSK YSKKDTVEAK SSSYEALLGA CSIHGDVRMG VSVRDDLQHS
VDSQKDMGYV LLSNLYCASG QWKEAEIVRK AMVDQGVKKM PGYSWIEVKN KVTVFVAGNI
SHPYREELYM ILNSLDPEMR NPCFSSFEI
//
