ID A0A1U8I652_GOSHI Unreviewed; 552 AA.
AC A0A1U8I652;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Double-stranded RNA-binding protein 2-like isoform X1 {ECO:0000313|RefSeq:XP_016673672.1};
GN Name=LOC107893246 {ECO:0000313|RefSeq:XP_016673672.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016673672.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016673672.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016673672.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016673672.1; XM_016818183.1.
DR AlphaFoldDB; A0A1U8I652; -.
DR STRING; 3635.A0A1U8I652; -.
DR PaxDb; 3635-A0A1U8I652; -.
DR GeneID; 107893246; -.
DR KEGG; ghi:107893246; -.
DR OrthoDB; 1215029at2759; -.
DR Proteomes; UP000189702; Chromosome 15.
DR GO; GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
DR CDD; cd19907; DSRM_AtDRB-like_rpt1; 1.
DR CDD; cd19908; DSRM_AtDRB-like_rpt2; 1.
DR Gene3D; 3.30.160.20; -; 2.
DR InterPro; IPR044450; AtDRB-like_DSRM_1.
DR InterPro; IPR044451; AtDRB-like_DSRM_2.
DR InterPro; IPR014720; dsRBD_dom.
DR PANTHER; PTHR46031; DOUBLE-STRANDED RNA-BINDING PROTEIN 6; 1.
DR PANTHER; PTHR46031:SF26; DOUBLE-STRANDED RNA-BINDING PROTEIN 6; 1.
DR Pfam; PF00035; dsrm; 2.
DR SMART; SM00358; DSRM; 2.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 2.
DR PROSITE; PS50137; DS_RBD; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00266}.
FT DOMAIN 1..70
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT DOMAIN 87..155
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT REGION 343..442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 372..401
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 402..428
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 552 AA; 61563 MW; 4D7BB839F803B977 CRC64;
MFKNQLQELA QRSCFNLPSY SCIREGPDHA PRFKATVNFN GETFESPMFC STLRQAEHAA
AEIALNTLAN RGPSRALAAR VLDETGVYKN LLQETAHRAG LNLPVYTTVR SGPGHIPSFS
CMVDLAGFSF TGDPARTKKQ AQKNAAMAAW SALRKCMIPV FRIKVSQDGS SSSSSPSLEF
KGKQEQEQVV IARFLSSLRP SEVRPSMQYD YQYEKHRSVP VCRDLTPPNQ SLYSAHGESW
PYPSFPLEMT MPIYQIWQQE QLLQLQSHLF SFPVSPVPPP APQFLPILDL DRHLQVRGQE
PRFMSPRIAI STTHPSLYIS NHSASQPTMG KSTVTIQEIH EEIKEESPKS PPPHVVNDRL
VPGQTNAETG IGESKQEDHK QKNTELESKS DTGHRKSDAG SRPVNNRLQN PHAFESSHLR
SQYPPRRSYY GNSRPAPSYA VASPTIQTVS PNSSMRPNMQ EPTTQVPVLP RMRIGAPPFS
TRPSFERTNL GSMHHSSIAP PVRIRSVVPV CSAPPSRKTP NFNKERLLPN KEKKDTVAED
LSTAASEFSN CF
//
