ID A0A1U8IG88_GOSHI Unreviewed; 627 AA.
AC A0A1U8IG88;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=Pentatricopeptide repeat-containing protein At1g63330-like {ECO:0000313|RefSeq:XP_016675368.1};
GN Name=LOC107894622 {ECO:0000313|RefSeq:XP_016675368.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016675368.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016675368.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016675368.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_016675368.1; XM_016819879.1.
DR AlphaFoldDB; A0A1U8IG88; -.
DR PaxDb; 3635-A0A1U8IG88; -.
DR GeneID; 107894622; -.
DR KEGG; ghi:107894622; -.
DR OrthoDB; 1218109at2759; -.
DR Proteomes; UP000189702; Chromosome 15.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 13.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF81901; HCP-like; 2.
DR PROSITE; PS51375; PPR; 13.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 133..167
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 168..202
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 203..237
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 238..272
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 273..307
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 308..342
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 343..377
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 378..412
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 413..447
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 448..482
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 483..517
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 518..552
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 553..587
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 627 AA; 70167 MW; 114220621E6EFA87 CRC64;
MGKLYSSIIL HPIVNGGRNP SNFHSSCSFN TVATHINALS KNSMPARGKP KKYDSLDNVD
DALFSFNKMI HKYPMPSVVE FNKLLGATVR MKRYAIAVSM CKQMEFFRVS PDVNLIVGFL
FWGKMLKLGV EPTVVTFSTL INGLCNQSQI SHAVGLFDEM IGQGYRPNLI VYSTILNGLC
KTGNTYRAVR FLRMMEERGF EPNIVAYSTV IDCLCKNGLL NEALDLFSEV KAKGIRPNIV
SYNCLIHALC NLGQQKETMQ LLNEMVDNNI SCDIVTYNVL IDAHCKEGMI SEAIEILDTM
RKHGIEPNLI TYNICIDAYC KEGMLAEAKD IVDTMIKQGI EPDVVTYSVL VDGHCLQNQM
DKAKSVFQLM IEKGCAPDIH SYNIMINGYC KAKRLDEAME LFDELAQNGQ IPDTVTYNTL
MQGMCRLGRV STACKLLRMM LTSGPVPNLV TCSILLDGLC KSGKLEEALK LFQAMQKSRL
EVDIVFYNIL IDGLCKAGNI ETGKELFHEL FVNGLKPDVY TYSIMINRFC TEGLPDEACQ
LFRSMEENDC LPDSFCYNIM IRGFLRNSYT SKATQLLKEM EEVNVVVEVE SHNHSAQRRG
YCGARCRGGY SCGRAGHGSR GGLFVYS
//