ID A0A1U8IGP8_GOSHI Unreviewed; 771 AA.
AC A0A1U8IGP8;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Flowering time control protein FCA-like {ECO:0000313|RefSeq:XP_016677276.1};
GN Name=LOC107896590 {ECO:0000313|RefSeq:XP_016677276.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016677276.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016677276.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016677276.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016677276.1; XM_016821787.1.
DR AlphaFoldDB; A0A1U8IGP8; -.
DR STRING; 3635.A0A1U8IGP8; -.
DR PaxDb; 3635-A0A1U8IGP8; -.
DR GeneID; 107896590; -.
DR KEGG; ghi:107896590; -.
DR OrthoDB; 3363347at2759; -.
DR Proteomes; UP000189702; Chromosome 16.
DR GO; GO:0005681; C:spliceosomal complex; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0048026; P:positive regulation of mRNA splicing, via spliceosome; IBA:GO_Central.
DR CDD; cd00201; WW; 1.
DR Gene3D; 2.20.70.10; -; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR15241:SF308; FLOWERING TIME CONTROL PROTEIN FCA; 1.
DR PANTHER; PTHR15241; TRANSFORMER-2-RELATED; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF00397; WW; 1.
DR SMART; SM00360; RRM; 2.
DR SMART; SM00456; WW; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR SUPFAM; SSF51045; WW domain; 1.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS50020; WW_DOMAIN_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 131..212
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 222..302
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 639..666
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT REGION 1..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 298..373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 386..479
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 511..556
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 724..755
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 357..372
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..479
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 726..741
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 771 AA; 83294 MW; 2C85B09EBB7F045A CRC64;
MSRYNSINTD TNTNFNDKFD AQDPYQHRRR SPSNFRGSGG GGGHRPFDSP PRQHHNSGGG
GGGFRPIGGG GGGGGFRPMA GGFEGNYPNP SPHHLQPAHT GQKRPFPFSG RGGGSPNRDR
FGGAGGGGNF AKLFVGSVPR TAREEDIRHL FEEHGDVIEV ALIKDKKTGQ PQGCCFIKYA
TLEEADRAIR ALHNQHTLPG GVGPIQVRYA DGERERLGAV EYKLFVGSLN KQATEMDVQE
VFSRFGRVED VYLMRDESKQ SRGCGFVKYS DREMALAAID ALNGIYTMRG CDQPLTVRFA
DPKRPRQGPG DSRGGAAAFG GPGFGPRFQT PRPRPAPNFG DAMGDRVPPT AWHPMSPQKM
GPTSNPGIRS MGNQLLPRSA DLAIPLNPGA PFGGPSDGSL PGLSVSSSST SVQGFNQSSS
QIPTVGHQIS PLQKPLGSPQ NLPPSFQLHP QAPMSYSQTR TSHVGQLQVP PASHTPFSQA
LPSQHLAGLS GQLSASRPLV QPNVSSGAAL QNPLNVNLPP NSAASAANQQ QLPAPNQQQP
LQPLQQSPSQ LAQMLSQQTQ TLQASFQSSQ QAFSQLQQQL QLMQPSNQNM TLQQNSQASK
HQWAGMMPQA VGSAPAKTPG TDVPSSASAA MKLVVECHWT EHTSPDGFKY YHNSLTRESK
WEKPEELTLF EQQQQQQQKP PVQQPQTQLH AAQQASQQAQ LQTQLQTQIC HPHQLQQPIY
PTAYPASGVR NQQSTQELGY GQLPVAPSPN DPSRFQQGLQ MVQDLAWKNK P
//
