GenomeNet

Database: UniProt
Entry: A0A1U8IMT3_GOSHI
LinkDB: A0A1U8IMT3_GOSHI
Original site: A0A1U8IMT3_GOSHI 
ID   A0A1U8IMT3_GOSHI        Unreviewed;       937 AA.
AC   A0A1U8IMT3;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   27-MAR-2024, entry version 25.
DE   SubName: Full=Protein NLP6-like isoform X2 {ECO:0000313|RefSeq:XP_016677109.1};
GN   Name=LOC107896448 {ECO:0000313|RefSeq:XP_016677109.1};
OS   Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016677109.1};
RN   [1] {ECO:0000313|Proteomes:UP000189702}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX   PubMed=25893780; DOI=10.1038/nbt.3208;
RA   Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA   Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA   Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA   Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA   Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT   "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT   provides insights into genome evolution.";
RL   Nat. Biotechnol. 33:524-530(2015).
RN   [2] {ECO:0000313|RefSeq:XP_016677109.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_016677109.1};
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   RefSeq; XP_016677109.1; XM_016821620.1.
DR   AlphaFoldDB; A0A1U8IMT3; -.
DR   GeneID; 107896448; -.
DR   OrthoDB; 603551at2759; -.
DR   Proteomes; UP000189702; Chromosome 16.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd06407; PB1_NLP; 1.
DR   InterPro; IPR045012; NLP.
DR   InterPro; IPR000270; PB1_dom.
DR   InterPro; IPR034891; PB1_NLP.
DR   InterPro; IPR003035; RWP-RK_dom.
DR   PANTHER; PTHR32002:SF35; PROTEIN NLP6; 1.
DR   PANTHER; PTHR32002; PROTEIN NLP8; 1.
DR   Pfam; PF00564; PB1; 1.
DR   Pfam; PF02042; RWP-RK; 1.
DR   SMART; SM00666; PB1; 1.
DR   SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR   PROSITE; PS51745; PB1; 1.
DR   PROSITE; PS51519; RWP_RK; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT   DOMAIN          568..649
FT                   /note="RWP-RK"
FT                   /evidence="ECO:0000259|PROSITE:PS51519"
FT   DOMAIN          841..923
FT                   /note="PB1"
FT                   /evidence="ECO:0000259|PROSITE:PS51745"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          92..112
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          508..527
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          540..576
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          670..702
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        562..576
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        670..687
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   937 AA;  102929 MW;  81D0B820F13799AE CRC64;
     MCEPEEDKAC PFPPKQQTQG IMDSVDDDDD GVDLHNSWPL DQLTFLSNPP SPFIISSSEQ
     PFSPLWTFSD EDSKLGSAAG YNLFLTCTSN SVNENPKEDD NKRGLSSPFL GPVPLENPDS
     YCAMKERMTQ ALRYFKESTQ QHVLAQVWAP IKTGGRYVLT TSGQPFVLDP NSNGLHQYRM
     VSLMYMFSVD GESDKQLGLP GRVFLQKLPE WTPNVQYYSS KEYSRLGHAL HYNVQGTLAL
     PVFEPSMQSC VGVLELIMTS QKINYAPEVD KVCRALQAVN LKSSEILDHP ITQICNKSRQ
     NALAEILEIL TIVCENHKLP LAQTWVPCQH RSVLAYGGGL KRSCTSFDGS CMGQVCMSTT
     DLASYVVDAH TWGFREACLE HHLQKGQGVA GRAFLCHNSC FCANITQFCK TEYPLVHYPR
     MLGSTACFAI CLRSAYTGDD DYVLEFFLPS AIVDSNEQRT LLGSILATMK QHFRSLKVAS
     GAKLEESEGF IQIIEASSDE RHDSILESVP IPPSVKSPPG INTSPDRELQ LDSSRQHLTM
     NLDPATTGGS VAASRSDKPV CLPQNKDGKK LERKRGKTEK SISLEVLQQY FAGSLKDAAK
     SLGVCPTTMK RICRQHGISR WPSRRINKVN RSLSKLKCVI ESVQGTTDST FGLASLASSP
     LPVTVGSVSW PSSLKGSNQQ NSPKSKPLEP QGEKDDSTQG SNGQALVEDW LLGGRTSSQE
     LFPQLNGLSP NMDEREEVMR CQREESADMP TSRGLCQGGL NVSATFSMPE ALLATECQEP
     FGGMLVEGAG SSKDLRNLCP SAAEAAVDET PPPYSDLALK QATTTYTRST PNLTARQEKT
     SVTVKATYRE DIIRFRISLT SGMVELKEEV AKRLKLDVGT FEIKYLDEDN EWVLIACDSD
     LQECLDVSIS SGSNMVRLSV QSAMANLGSS CESTGVL
//
DBGET integrated database retrieval system