ID A0A1U8IX11_GOSHI Unreviewed; 465 AA.
AC A0A1U8IX11;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Zinc finger protein JACKDAW-like {ECO:0000313|RefSeq:XP_016680913.1};
GN Name=LOC107899653 {ECO:0000313|RefSeq:XP_016680913.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016680913.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016680913.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016680913.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016680913.1; XM_016825424.1.
DR AlphaFoldDB; A0A1U8IX11; -.
DR SMR; A0A1U8IX11; -.
DR STRING; 3635.A0A1U8IX11; -.
DR PaxDb; 3635-A0A1U8IX11; -.
DR GeneID; 107899653; -.
DR KEGG; ghi:107899653; -.
DR OMA; NNHRFQS; -.
DR OrthoDB; 5363046at2759; -.
DR Proteomes; UP000189702; Chromosome 17.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR InterPro; IPR031140; IDD1-16.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10593; SERINE/THREONINE-PROTEIN KINASE RIO; 1.
DR PANTHER; PTHR10593:SF250; ZINC FINGER PROTEIN JACKDAW; 1.
DR Pfam; PF00096; zf-C2H2; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 62..84
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 15..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 265..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 465 AA; 50800 MW; 852D414DFD996614 CRC64;
MSGDGFSLPV SIGGFVHQEQ NNTNPNPKSN PVKKKRNLPG NPDPDAEVIA LSPKTLMATN
RFICEICNKG FQRDQNLQLH RRGHNLPWKL KQRNNKEPVK KKVYICPEKT CVHHDPSRAL
GDLTGIKKHF SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF
ITHRAFCDAL AEESARFSSV AGAATNLNFR NDVVNLPIGF GGIPQFGSGF TQDVSGMTVS
GLPEMVQIAS GNLFRSSSLN KFGTDSNPPL LQLPQGLKEE GGSKGKLMES LSPLYSDTQN
EQSKPAAPMS ATALLQKAAQ MGSTRSKPTS FFGNSFGVMS STSSQRSASL RSTQNRNGQL
QQIYPNVKQQ ESNLMASSSV SMSANAGLGT SNNFDRLILQ TGVKQNAPNQ LKMHPGSNSI
DQSLTRDFLG MGNDQSARPF LPQELAKFAS IGSTMGLNQF SSSNH
//
