ID A0A1U8J678_GOSHI Unreviewed; 179 AA.
AC A0A1U8J678;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Nuclear transcription factor Y subunit B-1-like isoform X1 {ECO:0000313|RefSeq:XP_016685850.1, ECO:0000313|RefSeq:XP_016685851.1};
GN Name=LOC107904097 {ECO:0000313|RefSeq:XP_016685850.1,
GN ECO:0000313|RefSeq:XP_016685851.1, ECO:0000313|RefSeq:XP_016685852.1,
GN ECO:0000313|RefSeq:XP_016685853.1};
GN Synonyms=LOC107957333 {ECO:0000313|RefSeq:XP_016748326.1,
GN ECO:0000313|RefSeq:XP_016748327.1, ECO:0000313|RefSeq:XP_016748328.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016685852.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016685850.1, ECO:0000313|RefSeq:XP_016685851.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016685850.1,
RC ECO:0000313|RefSeq:XP_016685851.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the NFYB/HAP3 subunit family.
CC {ECO:0000256|ARBA:ARBA00009053}.
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DR RefSeq; XP_016685850.1; XM_016830361.1.
DR RefSeq; XP_016685851.1; XM_016830362.1.
DR RefSeq; XP_016685852.1; XM_016830363.1.
DR RefSeq; XP_016685853.1; XM_016830364.1.
DR RefSeq; XP_016748326.1; XM_016892837.1.
DR RefSeq; XP_016748327.1; XM_016892838.1.
DR RefSeq; XP_016748328.1; XM_016892839.1.
DR STRING; 3635.A0A1U8J678; -.
DR PaxDb; 3635-A0A1U8J678; -.
DR GeneID; 107904097; -.
DR GeneID; 107957333; -.
DR KEGG; ghi:107904097; -.
DR KEGG; ghi:107957333; -.
DR OMA; IYCKYPS; -.
DR OrthoDB; 24067at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR GO; GO:0016602; C:CCAAT-binding factor complex; IBA:GO_Central.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR003958; CBFA_NFYB_domain.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR027113; Transc_fact_NFYB/HAP3.
DR InterPro; IPR003956; Transcrpt_fac_NFYB/HAP3_CS.
DR PANTHER; PTHR11064; CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; 1.
DR PANTHER; PTHR11064:SF141; TRANSCRIPTION FACTOR CBF_NF-Y_ARCHAEAL HISTONE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00808; CBFD_NFYB_HMF; 1.
DR PRINTS; PR00615; CCAATSUBUNTA.
DR SUPFAM; SSF47113; Histone-fold; 1.
DR PROSITE; PS00685; NFYB_HAP3; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 36..100
FT /note="Transcription factor CBF/NF-Y/archaeal histone"
FT /evidence="ECO:0000259|Pfam:PF00808"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 179 AA; 19300 MW; EF26D1C54C73A5DF CRC64;
MADGMGGGPT SPAGGSHESG GEHSSPQSTV REQDRYLPIA NISRIMKKAL PSNGKIAKDA
KDTVQECVSE FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYIE PLKIYLARYR
ELEGDTKGSA RGGDGSFKRD AAGALPAQNP QFSIQGSLNY INSQAQGQHM IIPSMQGNE
//
