ID A0A1U8J7K9_GOSHI Unreviewed; 366 AA.
AC A0A1U8J7K9;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Transcription factor RF2b-like {ECO:0000313|RefSeq:XP_016686327.1};
GN Name=LOC107904449 {ECO:0000313|RefSeq:XP_016686327.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016686327.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016686327.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016686327.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016686327.1; XM_016830838.1.
DR AlphaFoldDB; A0A1U8J7K9; -.
DR STRING; 3635.A0A1U8J7K9; -.
DR PaxDb; 3635-A0A1U8J7K9; -.
DR GeneID; 107904449; -.
DR KEGG; ghi:107904449; -.
DR OrthoDB; 473257at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR CDD; cd14703; bZIP_plant_RF2; 1.
DR Gene3D; 1.20.5.170; -; 1.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR044759; bZIP_RF2.
DR InterPro; IPR046347; bZIP_sf.
DR PANTHER; PTHR13690:SF103; BZIP TRANSCRIPTION FACTOR 18; 1.
DR PANTHER; PTHR13690; TRANSCRIPTION FACTOR POSF21-RELATED; 1.
DR Pfam; PF00170; bZIP_1; 1.
DR SMART; SM00338; BRLZ; 1.
DR SUPFAM; SSF57959; Leucine zipper domain; 1.
DR PROSITE; PS50217; BZIP; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 163..226
FT /note="BZIP"
FT /evidence="ECO:0000259|PROSITE:PS50217"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 83..134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 344..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 181..260
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..16
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..34
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 366 AA; 39932 MW; 47017A5E08E62FD5 CRC64;
MQDPPSLDPN PDPPFPSNAS SSAAQTTPSF PHPTSFRGSY HRRVHSEVQF RIPDDLDLVS
DPFEGLGSED DLFCTYVDIE KLGGSSKGSE DGGGAAGSSS GGSGRNPEGE EMSGLSGKGE
KNNGGGKGRH RYSHSIDGCS LMESIEAKKA MSPDKLAELW TIDPKRAKRI IANRQSAARS
KERKARYISE LERKVQTLQT EATTLSAQLT LFQRDTTGLT TENTELKLRL QAMEQQAQLR
DALNEALKKE VERLKIATGE ITTPTDTFNL GMHHMPYNQS SFFPPQPEHM QVDTQNIQMP
SFHPLRSNML TPNQSVVTSS NSQAFADIMR QDPLGRLQGL DISSRSSHLV KSESPSISAG
ESSGTL
//
