ID A0A1U8J9B3_GOSHI Unreviewed; 585 AA.
AC A0A1U8J9B3;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like isoform X1 {ECO:0000313|RefSeq:XP_016685238.1};
GN Name=LOC107903644 {ECO:0000313|RefSeq:XP_016685238.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016685238.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016685238.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016685238.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_016685238.1; XM_016829749.1.
DR AlphaFoldDB; A0A1U8J9B3; -.
DR PaxDb; 3635-A0A1U8J9B3; -.
DR GeneID; 107903644; -.
DR KEGG; ghi:107903644; -.
DR OrthoDB; 1218109at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR45613:SF207; OS10G0497300 PROTEIN; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 78..112
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 113..147
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 148..182
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 183..217
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 218..248
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 250..284
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 285..319
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 320..354
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 390..424
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 425..459
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 460..494
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 495..529
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 530..564
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 585 AA; 65238 MW; D5EBA1C789377C28 CRC64;
MGLSKKPMSM PVRGKGKRDH RFDNVDHALS LFNKMIEKYP KPSIVEFNKL LGAIVKMKHY
AIVVSKYRQI ELLGVSHNVY SMNILINCFC QLGRIDFGFS VLGKMLKLGV EPGAVTFSTL
INGLCNQSKI SEAVCMFDEM TEKGYQPHLI VYNTVLKGLS KTGNTDRAVR FLRLMESRGF
EPNIVAYNTV IDCLCKNGLL QEALNLLSEM KVKGIRPNII TYNCLIHGMC NSGQQQEATR
LLNEMVDNNI IVTYNTLVDA LCKEGTISKA VEIVDTIRKQ GIEPDVVTYS TLVDAHCKEG
MVSEAEDIVD AMIKRGIEPN VVTYSALVNG HCLQNEMDKA RRVFNLMIEK GCAPNIVTYS
TVINGYCKGK RLDEAMELFH EISQKGPIPN IFTYNTLLQS MFQLGKVSTA CELFRKMLAS
GQVPDIATCL ILPDGLCKTG HIKEALKLFQ AMQNSGLELD IVPYTILIDG FCKAGHIEVA
KELFHQLSDN GLKPDVYTYC IMINGLCKEG LPDEAYRLFG SMGDNDCLPN SCCYNVMIRG
FLRNSYTSKA TQLLTEMVGK GFSADIFTAT LFMELIIYSN KSILL
//
