ID A0A1U8JAV2_GOSHI Unreviewed; 1045 AA.
AC A0A1U8JAV2;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Uncharacterized protein LOC107905331 isoform X2 {ECO:0000313|RefSeq:XP_016687457.1};
GN Name=LOC107905331 {ECO:0000313|RefSeq:XP_016687457.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016687457.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016687457.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016687457.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_016687457.1; XM_016831968.1.
DR AlphaFoldDB; A0A1U8JAV2; -.
DR OrthoDB; 35225at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15539; PHD1_AIRE; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR032308; TDBD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR47025:SF27; ACYL-COA N-ACYLTRANSFERASE WITH RING_FYVE_PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47025; AUTOIMMUNE REGULATOR; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF16135; TDBD; 2.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 660..705
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 439..478
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 460..478
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1045 AA; 115823 MW; 865CC020C151176D CRC64;
MKRELDYGVD GSLGQTREAV IHSQTQASSS SSCCKRVNST QVNGYIVYTR VKKSRIDCRV
SENLDNQKLK DFNEPINSFK VSLIDEDQEN RILADANGVN NNLIESRSGN GNLAGDKVVI
ENVVDESLVV RDIVKGGPFI EALIEESHTI GENAIVGNLV VEAIGIDGKP VVQSCQSMDE
LETRPVEKGG FDSSDGNDDD LLLKTLRRPK KSLWGPKVEA EESLGCEQQN VENVLVSNFG
GEEAAEDSGL TTPRKNLELK MSKKISLNKC PMTVKELFDT GLLDGVPVVY MGTISSKTAG
LRGIITDGGI LCSCSLCKGR RVVPPSQFEI HACKQYKRAA QYICFENGKS LLEVLRACRR
GPLHTLEATI QNIIRAVPEQ KCFTCRRCKG SFPVIHVGQV GPLCNSCVEL KKSQFITMSS
PSVGTRSQEP VSMLQSFGSA SLSVSPQNRS QRKKANKSSE LDLTSNSPQC SSSSISLQNR
RPWKTTRKFI VGASYFRLVI SRLTKPGLFT KSLKSASVHI SSQDKGHWRT KKKPVKPVLM
SKMFKGASSP IYSPNGSQWK MTTKDQRLHK LVFEEDGLPD GTEVAYYARG QRLLEGYKKG
FGIICRCCNC EVSPSQFEAH AGWASRRKPY AYIYTSNGVS LHELAISLSK GHLYSAKDND
VACIICADGG NLLLCDGCPR AFHKECASLP TIPHGRWYCK YCQNMLMREK CAEHNANAAA
AGRILGVDAI EQITSRCVRI VKNIETELSG CTLCRACDFS KSGFGPRTVI LCDQCEKEYH
IGCLRTHKMA DLREIPKGKW FCCSDCGRIH STLQKLLIHG AERLPDSLLD VLKKKYAEKG
LDADINIDVR WRLLSSKFAS PETRLLLSQA VGIFHECFNP IVDATTGRDL IPCMVYGRNL
KGQEYGGMYC AVLTINSFVV SAGIIRVFGQ EIAEIPLVAT SIANHGKGYF QLLFSCIEKL
LAFLNVKNII LPAAEEAESI WTDKFGFKKL RPDQLSEYRK SCCQMVIFQG TSMLQKEVPI
HQLISSIERR ELYEHLNQGR SDFLE
//
