ID A0A1U8JE58_GOSHI Unreviewed; 863 AA.
AC A0A1U8JE58;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Uncharacterized protein LOC107906189 isoform X1 {ECO:0000313|RefSeq:XP_016688597.1, ECO:0000313|RefSeq:XP_016688598.1};
GN Name=LOC107906189 {ECO:0000313|RefSeq:XP_016688597.1,
GN ECO:0000313|RefSeq:XP_016688598.1, ECO:0000313|RefSeq:XP_016688599.1,
GN ECO:0000313|RefSeq:XP_016688600.1, ECO:0000313|RefSeq:XP_016688601.1,
GN ECO:0000313|RefSeq:XP_016688602.1, ECO:0000313|RefSeq:XP_016688603.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016688597.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016688597.1, ECO:0000313|RefSeq:XP_016688598.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016688597.1,
RC ECO:0000313|RefSeq:XP_016688598.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016688597.1; XM_016833108.1.
DR RefSeq; XP_016688598.1; XM_016833109.1.
DR RefSeq; XP_016688599.1; XM_016833110.1.
DR RefSeq; XP_016688600.1; XM_016833111.1.
DR RefSeq; XP_016688601.1; XM_016833112.1.
DR RefSeq; XP_016688602.1; XM_016833113.1.
DR RefSeq; XP_016688603.1; XM_016833114.1.
DR GeneID; 107906189; -.
DR KEGG; ghi:107906189; -.
DR OrthoDB; 1748at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR GO; GO:0030014; C:CCR4-NOT complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR CDD; cd16618; mRING-HC-C4C4_CNOT4; 1.
DR CDD; cd12438; RRM_CNOT4; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR034261; CNOT4_RRM.
DR InterPro; IPR039780; Mot2.
DR InterPro; IPR039515; NOT4_mRING-HC-C4C4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12603; CCR4-NOT TRANSCRIPTION COMPLEX RELATED; 1.
DR PANTHER; PTHR12603:SF0; CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF14570; zf-RING_4; 1.
DR SMART; SM00361; RRM_1; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 9..57
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 110..196
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 321..340
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 863 AA; 94524 MW; 2AA9577B90CF3B86 CRC64;
MSDEGEKTCP LCAEEMDLTD QQLKPCKCGY EICVWCWHHI MEMAEKDETE GKCPACRCAY
DKDRIVGMAA NCERLVAEIN SERKSKSTKA KTKSSEGRRQ LSSVRVIQRN LVYIVGLPLN
LGDEDLLQQR EYFGQYGKVL KVSMSRTATG VIQQFPNNTC SVYITYSKEE EAIHCIRSIH
GFVLEGRPLK ACFGTTKYCH AWLRNVPCNN PDCLYLHEIG SQEDSFTKDE IISAYTRSRV
QQITGATNNM LWPAGNMLPP PVNDYCPTPS YASAAKPISK NAPNNTTVCI PKGSPPNGST
GRSVALPAGA SWGMRALNHP QTAGLASSNG PSKQKSDTVR SALPFSSAVT NTNQNYPVHG
DVIKKSSEEI HDMQMKGKQQ NADLDCQTTV LEKPTTLGGV SASKSLSCEL SCPPVFNHYE
QGSNMPSTVT NSTFFHAEQS FISSSEKPGC TGSTDGKIHS LCSDMQKLTV DRNVYGGPSN
VLRPSSADSD HGSSGSPSSL CLQQFYTEDY REPLSSLAIG RTVTSPSGFC VSKQQSDWIN
DRQTQPVANR SSDIEEDILS FDNQRLNDPK VISRSSYVPN SPISLHLSNQ SRPHWFQRGA
VNLDADAFNV DNKVSDSLHL HGSSVSSLSN GYPEKYISSS IGSDITVDGS HLLPSEGKGK
QIGRFLDYVE GNDAKETGES SIISNILSLD FDTWDESLAS PHNLANLLCD TVKQPNILKL
CTSWKAPNNG QSRFSFARQE DSKYHPFDME SSFSLFGQMP QNPSSQEFAE STDLYQNKFG
ISNGFSSHHF AESDNAISGP SVFSSNKLSA VSRPQISAPP GFSVPSRTPP PGFSHERIDH
AYDTTSEILI RLWQVVGLVA LGI
//
