ID A0A1U8JEK8_GOSHI Unreviewed; 535 AA.
AC A0A1U8JEK8;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=CLP protease regulatory subunit CLPX2, mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_016688762.1};
GN Name=LOC107906309 {ECO:0000313|RefSeq:XP_016688762.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016688762.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016688762.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016688762.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
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DR RefSeq; XP_016688762.1; XM_016833273.1.
DR AlphaFoldDB; A0A1U8JEK8; -.
DR STRING; 3635.A0A1U8JEK8; -.
DR PaxDb; 3635-A0A1U8JEK8; -.
DR GeneID; 107906309; -.
DR KEGG; ghi:107906309; -.
DR OrthoDB; 452393at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR GO; GO:0005759; C:mitochondrial matrix; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IBA:GO_Central.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0140662; F:ATP-dependent protein folding chaperone; IEA:InterPro.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0051082; F:unfolded protein binding; IEA:InterPro.
DR GO; GO:0051603; P:proteolysis involved in protein catabolic process; IBA:GO_Central.
DR CDD; cd19497; RecA-like_ClpX; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR004487; Clp_protease_ATP-bd_su_ClpX.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR00382; clpX; 1.
DR PANTHER; PTHR48102; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED; 1.
DR PANTHER; PTHR48102:SF16; CLP PROTEASE REGULATORY SUBUNIT CLPX2, MITOCHONDRIAL-LIKE ISOFORM X1; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|RefSeq:XP_016688762.1};
KW Protease {ECO:0000313|RefSeq:XP_016688762.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 204..402
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 417..509
FT /note="Clp ATPase C-terminal"
FT /evidence="ECO:0000259|SMART:SM01086"
SQ SEQUENCE 535 AA; 59407 MW; 78D26808B96C7463 CRC64;
MLSSLFRLTS LRSRKTPVGI TSSWSIFRQK WNGTEEYDHI RAEVNCPRCS NQMPVLFSNR
PLSITAREPG LFQALNLCRN CKTAFYFRPF KLVPLQGSFV ELGRIKGDAE GISRKDPGGI
RKLNDDCDGD KDDVSGRLER ELPTPKEIYG RLDEFVIGQQ KAKKVLSVAV YNHYKRIYHS
SEKNEASELG DNDEHVANDF VELDKSNVLL IGPTGSGKTL LAKTLARIVN VPFVIADATS
LTQAGYVGED VESILYKLLV EAKFDVEAAQ HGIVYIDEVD KITKKAESSN MGRDVSGEGV
QQALLKMLEG TIVNIPMPDK GARRNPHGDS FQIDTKDILF ICGGAFNDLE KTISERRQDS
SIGFGAPVRE NMRTSPLITA AVASSLLESV ESDDLIAYGL IPEFIGRFPI LVGLSALDED
QLVEVLMKPK NALGKQYKKM FNMNGVKLYF TETALRLISK KAMAKNTGAR GLRAILENIL
TEAMFEIPNT KMESHRVNAV LVDEEALGSV DERGCGAKIL YADDEMDRFL AKEKH
//