ID A0A1U8JEZ7_GOSHI Unreviewed; 316 AA.
AC A0A1U8JEZ7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Probable WRKY transcription factor 40 {ECO:0000313|RefSeq:XP_016688892.1};
GN Name=LOC107906423 {ECO:0000313|RefSeq:XP_016688892.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016688892.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016688892.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016688892.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_016688892.1; XM_016833403.1.
DR AlphaFoldDB; A0A1U8JEZ7; -.
DR SMR; A0A1U8JEZ7; -.
DR STRING; 3635.A0A1U8JEZ7; -.
DR PaxDb; 3635-A0A1U8JEZ7; -.
DR GeneID; 107906423; -.
DR KEGG; ghi:107906423; -.
DR OMA; PTMTLDF; -.
DR OrthoDB; 5478560at2759; -.
DR Proteomes; UP000189702; Chromosome 19.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 2.20.25.80; WRKY domain; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31429; WRKY TRANSCRIPTION FACTOR 36-RELATED; 1.
DR PANTHER; PTHR31429:SF3; WRKY TRANSCRIPTION FACTOR 40-RELATED; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; WRKY DNA-binding domain; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 159..225
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 93..138
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 217..278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 49..76
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..107
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 108..130
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..255
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 262..278
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 316 AA; 34903 MW; 985808AE1CF75AC8 CRC64;
MDTSSWVDTS LDLNPSSDRP LPLDTPKKEP SGNGNLIVFG KKLSMKEESG ALVEELNRVN
EENKKLTEML AAMCESYNAL QSQLTNLMSK IPEKELSHSK KRKSESSNNN HNNNNDNYNF
GIIGNSESSS TDEDSCKKPK EEIIKAKVSR VYVRTEASDT SLVVKDGYQW RKYGQKVTRD
NPSPRAYFKC SFAPTCPVKK KVQRSIDDQS VVIATYEGEH NHLPPPQMEP TSGSSHRGSA
SLNPSGPTMT LDFGKTKPSG SDVARICSSS QPKMDSPQVR QYLVEQMATS LTKDPKFTAA
LAAAISGRMF QQSPVE
//
