ID A0A1U8JNS3_GOSHI Unreviewed; 1063 AA.
AC A0A1U8JNS3;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Pentatricopeptide repeat-containing protein At5g27270-like {ECO:0000313|RefSeq:XP_016691925.1, ECO:0000313|RefSeq:XP_016691926.1};
GN Name=LOC107909060 {ECO:0000313|RefSeq:XP_016691925.1,
GN ECO:0000313|RefSeq:XP_016691926.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016691926.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016691925.1, ECO:0000313|RefSeq:XP_016691926.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016691925.1,
RC ECO:0000313|RefSeq:XP_016691926.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_016691925.1; XM_016836436.1.
DR RefSeq; XP_016691926.1; XM_016836437.1.
DR STRING; 3635.A0A1U8JNS3; -.
DR PaxDb; 3635-A0A1U8JNS3; -.
DR GeneID; 107909060; -.
DR KEGG; ghi:107909060; -.
DR OrthoDB; 1202574at2759; -.
DR Proteomes; UP000189702; Chromosome 20.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF14; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 2.
DR Pfam; PF17177; PPR_long; 1.
DR SUPFAM; SSF81901; HCP-like; 3.
DR PROSITE; PS51375; PPR; 13.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 185..219
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 255..289
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 290..324
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 325..359
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 360..394
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 373..487
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 395..429
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 702..736
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 772..806
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 807..841
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 842..876
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 877..911
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 912..946
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 947..981
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 14..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1063 AA; 120493 MW; 24CF241FBA1B0639 CRC64;
MESLKSTFLF STTHLHPSFT LPKPPSKPPK LRIRSSVRPD PFSLSDGNPT KPKPKSKNPK
NPLSDDNARR IIKKKAQYLS ALRRNQGPRA MTPKWIKRTP EQMVKYLEDE RNGELYGKHV
VAAIKAVRAM GERKEGEADV RRVMGSFVGK LSFRDMCVVL KEQRNWRQVR DFFAWMKLQL
SYRPSVIVYT IVLRAYGQVG KIKLTEQTFL EILEVGCEPD EVACGTMLCT YARWGRHKAM
QSFYSAVQER GITLSTAVYN FMLSSLQKKS LHEKVIDLWR QMVDKGVAPD RFTYTVVIHS
LVKGGLCEEA FKAFDEMKKL EFVPEEATYS LLISSHTKDG KWQDALNLYE DMRSRGIVPS
NYTCASLLTL YYKNEDYSQA LSLFTEMERN KIAVDEVIYG LLIRIYGKLG LYEDAQRTFE
EIDQLGLLSD EKTYLAMAQV HLNSGNAKRA LDIIEMMKSR DIWFSRFAYI VSLQCYVMSE
NLDAAEVTFQ ALAKTGLPDS GSCNDMLRLY IKLNLTGRAK KFIVQLREDQ IAFDEELYRT
VVRIYCKEGM LEDIGQLTKE MVTNDSYKDN KFIQTFFKAI CGEPLRYQKV KGNVASNQLD
STALGYLLRL YLECKDFNNL EEILKLLLET AGSMSVLTQL ISNFLKEGDL SNVKALNDQV
VRLGCSVDDA TIASIIGIYG KEQKLKQAQD IFTAVADSPT CGKLIYNSMI DAYIKCGKPE
AAYSLYKEAF KKGHDLGAIA ISKVVYSLTT SGKHQEAKEM IHLSFEDNVE LDTVAYNTFI
KAMLEAGKLN FATSIYEHML SKGLSPSIQT YNTLISVYGR GRKLDKAVEM FNLAHSSGMT
LDEKAYMNLI CYYGKAGKRD EAFSLFTRMQ EEGINPGMVS YKIMINMYAS AGLCDEVEKL
IEAMQRDGCS LDNSTYLSLI QAYTKCLKYA EAEQTISCMR RMGIPPTCAH FNLLLYAFAN
VGMMSEAERV YKELVTTGIS PDLACYRAML RGYIDYGLVE EGINFFEQIR DTAEPDKYIM
SAAVHIYKYA GKEPEASSVQ DSMNNFGIPF LENLKVGAKM KIP
//