ID A0A1U8JTJ8_GOSHI Unreviewed; 398 AA.
AC A0A1U8JTJ8;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Uncharacterized protein LOC107910307 isoform X1 {ECO:0000313|RefSeq:XP_016693606.1};
GN Name=LOC107910307 {ECO:0000313|RefSeq:XP_016693606.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016693606.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016693606.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016693606.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016693606.1; XM_016838117.1.
DR AlphaFoldDB; A0A1U8JTJ8; -.
DR STRING; 3635.A0A1U8JTJ8; -.
DR PaxDb; 3635-A0A1U8JTJ8; -.
DR OrthoDB; 1213307at2759; -.
DR Proteomes; UP000189702; Chromosome 20.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0016567; P:protein ubiquitination; IBA:GO_Central.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR032010; APD1-4_M.
DR InterPro; IPR032008; APD1-4_N.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46858; OS05G0521000 PROTEIN; 1.
DR PANTHER; PTHR46858:SF6; OS06G0252500 PROTEIN; 1.
DR Pfam; PF16041; APD1-4_M; 1.
DR Pfam; PF16040; APD1-4_N; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 258..279
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 346..386
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 398 AA; 45197 MW; 05BBC4ECD692AFC5 CRC64;
MFRPGFVRAS NHAQLPQWKD TWTRVLPALT LWICVSVILR YGYYGNCSMV LGPSSSRLMK
ASSVFVQQVQ VRDENWKGAL VYVFSEKPEL SNEVNWNFSN YLIVGAYARK GYSLWLNKGS
RISIRWATQP SRLDKIELII IKGEKKRETL LPEQTVPFGA LFLNEPVTGK EADYNIEEDD
KYSVGLINSN PRSIIITFSL NVTSKVYDVT KASDMCSTLN GSCRLQLQFP HTQYVIVSTP
DNGDIAGRYV ELSFVARVVT YIAILGFFII IILLVLKYLG ACNDERTVIN SNTTFREISW
RTETDPILPE KSVRLTYGTT AEDDNDDAET GSSSSSSEDL YDAKLCVICY DDQRNCFFVP
CGHCATCYDC AQRIMEEDNK VCPICRRLIH KVRRLFSP
//
