ID A0A1U8K002_GOSHI Unreviewed; 620 AA.
AC A0A1U8K002;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Pentatricopeptide repeat-containing protein At3g48250, chloroplastic-like {ECO:0000313|RefSeq:XP_016694318.1};
GN Name=LOC107910906 {ECO:0000313|RefSeq:XP_016694318.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016694318.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016694318.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016694318.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016694318.1; XM_016838829.1.
DR AlphaFoldDB; A0A1U8K002; -.
DR STRING; 3635.A0A1U8K002; -.
DR PaxDb; 3635-A0A1U8K002; -.
DR GeneID; 107910906; -.
DR KEGG; ghi:107910906; -.
DR OrthoDB; 1210382at2759; -.
DR Proteomes; UP000189702; Chromosome 21.
DR GO; GO:0008380; P:RNA splicing; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR044578; BIR6-like.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47003; OS01G0970900 PROTEIN; 1.
DR PANTHER; PTHR47003:SF2; OS01G0970900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 260..294
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 367..401
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 402..436
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 437..467
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 620 AA; 70974 MW; B234C816887FDF2E CRC64;
MNRSKAILSS LRLANSILST RLTSTPSFSS QVTRFSSQLS FQSHSSLLTN IHQSLSFSTK
PNSLLQLILT NDWSGELETC LHEFKSALTH ETVIYVLKKL DKDSKKASSF FNWVRQENGF
KPNSSVYSFM LRIFANKATM KEFWITLREM KDLGFYLDEE TYYTIHSSFR NNKMPSDVVA
LTHFYKRMVE ENAKDSIARK VADVIAGDEW SNETEKILDG MGTDLSDNLV IRVLKELRTY
PRKGLQFFHW ASKGSNYKHN TITYNALIRI LARRDSIAEF WGVVDEMKGE GFEMDIDTYI
KVSRNFQKFK MLEDAVKLYE IMMDGPYKPS AQDCSLLLRS ISRADGQDLS LVFRVVNKYE
AAGYSLSKAI YDGIHRSLTK VGKFDEAEKI MKTMKNAGCE PDNITYSQLV FGLCKARRLE
EACKVLDEMK ANGCCPDIKT WTILIQGHCD ANQIDDALMC FAKMVKTCEA DADLLDVLIN
GFISQNRVDG AYKLLVEMVN VVHLRPWQAT FKLLIEKLLG KRKLEESVNL LKLMKKLNYP
PYLEPFVQYI SKQGTVEDAM EFLKALSVKE YPSIGAYLHT LESFLEEGRH TEAQDLLYKL
PHHIRNHPKT SQLFGTKSTA
//
