ID A0A1U8K4N3_GOSHI Unreviewed; 783 AA.
AC A0A1U8K4N3;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Protein NBR1 homolog {ECO:0000313|RefSeq:XP_016695574.1};
GN Name=LOC107912046 {ECO:0000313|RefSeq:XP_016695574.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016695574.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016695574.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016695574.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016695574.1; XM_016840085.1.
DR AlphaFoldDB; A0A1U8K4N3; -.
DR STRING; 3635.A0A1U8K4N3; -.
DR PaxDb; 3635-A0A1U8K4N3; -.
DR Proteomes; UP000189702; Chromosome 21.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd14947; NBR1_like; 1.
DR CDD; cd14319; UBA_NBR1; 2.
DR Gene3D; 3.30.60.90; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 2.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR032350; N_BRCA1_central.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR000433; Znf_ZZ.
DR InterPro; IPR043145; Znf_ZZ_sf.
DR PANTHER; PTHR20930; OVARIAN CARCINOMA ANTIGEN CA125-RELATED; 1.
DR PANTHER; PTHR20930:SF0; PROTEIN ILRUN; 1.
DR Pfam; PF16158; N_BRCA1_IG; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF00569; ZZ; 1.
DR SMART; SM00666; PB1; 1.
DR SMART; SM00291; ZnF_ZZ; 1.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS50135; ZF_ZZ_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00228}.
FT DOMAIN 4..89
FT /note="PB1"
FT /evidence="ECO:0000259|PROSITE:PS51745"
FT DOMAIN 369..419
FT /note="ZZ-type"
FT /evidence="ECO:0000259|PROSITE:PS50135"
FT REGION 226..245
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..243
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 783 AA; 84652 MW; F361E32474A0D556 CRC64;
MESDLVIKVK YGDTLRRFTA CIDDGERRGL NMAGLRAKIS GLFNFPVDTE LTLTYIDEDG
DVVTLVDDDD LYDVMRQRLK FLRIDVQPNN DKLGEPCAAS SQSSTPLRSP SFQLPSEGFN
TVAADILKSA PEPLRGTLSE VLSKLSSDVA LIVASASPVL GDLVECLSKT GQSYLGPVSN
SGAAADSSMQ PVASSVSHCT TVGATDPDPL RDGGLRVVLP KSTDVNSTCK ANKEGNTGNA
TRGVNVPAVP DSDSIDLNVD PLSDANLTGC APMASEPSSS NIFACNDQKN AKEIIGRKKG
KSVSFDTSAS FIDATVKFYP INVMGKDPSN ECPFSGVPVA NDPVAPLSFS PSKRVFSSTA
GNVMFGTFHK GIQCDGCGVL PIAGPRFKSK VKDDYDLCSI CFSKMGNEAD YIRMDRPVHS
SNPWFCRASN DPIPSALPHV LRNRALMSAQ PKLESRFVLD VNVIDGTVMM PSTPFTKIWR
MRNNGTVPWF HGMQLVWIGG DKLRNTISVD IEIPPDGVPV DGELDIAVDF TAPQLPGRFV
SYWRMASQAG IKFGQHVWVL IHVDASLKDM NTDNAQGLNL NLPPENSASR DTEVCNSNVG
PALVEPLINE QSTKEQSLNN RDVTTPIHTL SSFAAYSPII DHQDISLLAF PETPSPSSLS
SYPIIDLSEA ALDEPVPMSP LPAPCEQAPS EEESENAVEQ TLLKELEDMG FKQVDLNKEI
LRMNEYDLEK SIDDLCGVAE WDPVLEELQE MGFCDAEMNK MLLKKNNGSI TAVVMDLLGG
EGA
//
