ID A0A1U8KFJ4_GOSHI Unreviewed; 578 AA.
AC A0A1U8KFJ4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Pentatricopeptide repeat-containing protein At2g35130-like {ECO:0000313|RefSeq:XP_016701250.1};
GN Name=LOC107916457 {ECO:0000313|RefSeq:XP_016701250.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016701250.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016701250.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016701250.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_016701250.1; XM_016845761.1.
DR AlphaFoldDB; A0A1U8KFJ4; -.
DR STRING; 3635.A0A1U8KFJ4; -.
DR PaxDb; 3635-A0A1U8KFJ4; -.
DR GeneID; 107916457; -.
DR KEGG; ghi:107916457; -.
DR OrthoDB; 1209648at2759; -.
DR Proteomes; UP000189702; Chromosome 22.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR044179; PPR5-like.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 9.
DR PANTHER; PTHR47874; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR47874:SF4; EXPRESSED PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 2.
DR Pfam; PF13812; PPR_3; 2.
DR Pfam; PF17177; PPR_long; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 11.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 156..190
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 191..225
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 226..260
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 239..374
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 261..295
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 296..330
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 331..365
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 366..400
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 401..435
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 436..470
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 471..505
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 506..540
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 578 AA; 65582 MW; 3B87C0A67B37BF14 CRC64;
MFVVGNTLNH VYIQPRSNKP SFKWMAKNSS SSDVAIEKWK RDGVYIDKRG KLRTFHHKKL
SRKRCGSLRG QGWKYGSSFV DGVFPVLSPI AQQILDFLQQ EVDADRVWGS LDNLSPSHST
WDDLINVAVQ LRLNKKWDPI VLLCEWILQR SSFQLDVMCF NLLIDAYGQK SLYKKVESKY
LELLEARCVP TEDTYALLVK AYCTAGLKQK AEAVFAEMRK YGLSPSATVY NAYIDGLMKG
GNSQKAIEVF QRMKRDGCQL NTETYTLMIN LYGKASKSYM ALKLFDEMRS QKCKPNICTY
TALVNAFARE GLCEKAEEIF EQLQEAGHEP DVYAYNALME AYSRAGYPYG AAEVFSLMQH
MGCEPDRASF NIMVDAYGRA GLYEDAESVF EEMKKLGITP TMKSHMLLLS AYSRVGNIAK
CENIVNQIQE SGLQPDTFVL NSMLNLYGKL GQFENMEKVL VAMEKGPYEA DISTYNILIN
VYGRAGYFNR MEELFQSLPA KNLTPDVVTW TSRLGAYSRK KLYQRCLEIF EEMIDAGCYP
DGGTAKVLLS ACSSEDQIEQ VTTVIRTMHK DMKTVLPI
//
