ID A0A1U8KVB5_GOSHI Unreviewed; 555 AA.
AC A0A1U8KVB5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Endo-1,4-beta-xylanase A-like {ECO:0000313|RefSeq:XP_016706407.1};
GN Name=LOC107921066 {ECO:0000313|RefSeq:XP_016706407.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016706407.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016706407.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016706407.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 10 (cellulase F) family.
CC {ECO:0000256|ARBA:ARBA00007495}.
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DR RefSeq; XP_016706407.1; XM_016850918.1.
DR AlphaFoldDB; A0A1U8KVB5; -.
DR STRING; 3635.A0A1U8KVB5; -.
DR PaxDb; 3635-A0A1U8KVB5; -.
DR GeneID; 107921066; -.
DR KEGG; ghi:107921066; -.
DR OrthoDB; 1328474at2759; -.
DR Proteomes; UP000189702; Chromosome 25.
DR GO; GO:0031176; F:endo-1,4-beta-xylanase activity; IEA:UniProt.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR044846; GH10.
DR InterPro; IPR001000; GH10_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR31490; GLYCOSYL HYDROLASE; 1.
DR PANTHER; PTHR31490:SF3; GLYCOSYL HYDROLASE FAMILY 10 PROTEIN; 1.
DR Pfam; PF00331; Glyco_hydro_10; 1.
DR PRINTS; PR00134; GLHYDRLASE10.
DR SMART; SM00633; Glyco_10; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR PROSITE; PS51760; GH10_2; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023326};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..555
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010543398"
FT DOMAIN 201..497
FT /note="GH10"
FT /evidence="ECO:0000259|PROSITE:PS51760"
SQ SEQUENCE 555 AA; 62774 MW; 9C9A12B3F441B8C6 CRC64;
MKHSLVFGGF WAFFILLSGS LVASYDGPLY DFTAYTECKA QPEEPLYQGG ILKDETPIMR
PAIFGKTATG FYTPAFLLKN LTVGNFYCFS TWIKIQGANS ALIRASLKTE NRTYNCIGTV
LAKNGCWSFL KGGFVLDSPS NLALLLFQNS DDKDIDITID SSSLQSFTDQ EWRFNQQFMI
NTQRKRAVTI HVSDQQGNRL QGAVITINQV SKDFPFGSAI AHTILGNLPY QNWFVERFNA
AVFENELKWY ATEPDQGKTN YTLADQMLEF VRAHQIIARG HNIFWEDPKY TPAWVRNLTG
PDLQSAVNSR IQSLMSKYKE EFIHWDVSNE MLHFDFYEQR LGPDATLHFY ETAHQSDPLA
TLFMNEFNVV ETCSDVKSTV DTYIERIREL ESGGMYMDGI GLESHFTVPN LPLMRAVIDK
LATLRLPIWL TEVDISSSVG KELQGVYLEQ VLREGFSHPS VNGIMLWTAL HPKGCYEMCL
TDGNFKNLPA GDVVDKLLKE WESGEMKGVT GEHGSYSFYG FLGEYKVNVG YGDRAANFTF
SLPPSGETKH FSIHL
//
